Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0862 ATGGAAGCGTTGGGAGTAATTTGGGAAGTTGCGAAAAGTTTGTTGAGTTGCACAAATGCACAAGCTGCCTATGTTTATAAGCTGCAGGAGAATCTGGAATCACTGAACAAAATATGGGATGATCTTCAAAACAAGGAAAAGGACGTGCTAACAGAAATTGAAAGAGCTGAGAGCACAAGAGTGATGAAAAGGACAAAGGAAGTGGCCAGTTGGCTTCAAGAATTTCAAAAACTTCAAGAGAAAATGATGAAGGATATTCCAAATTTTCAAGAAGTTCAAAGTAACCGATGTCTGAATGGTTATTGCCCAAAGAACTATGTTTCAAGCTACAAGGTGGGAAAGAAAATTGTTGAGAGGCTCAACGAGGTGAATGCCATGCTTTCTAAAGTTGATAAGATCACGCAGTTTGCTATTCAGCAACCACCTAAACCTGTTGCTGAGATGCCTTGCGGTGATACTATAGGCTTGGACTTGATGGTCAACGAAGTCTGGAATAGTCTTAAAGATGATAATGTGGGAATAATTGGTCTGTATGGAATGGGTGGGGCCGGAAAAACTACACTCATGAAGAGAATTCAAAGTGAGTTAGGAAAGAGGGAGCATAGTTTTGATCTAGTGTTGTGGGCAGTGGTTTCTAAAGATTGTGATACAAAGAAAATCATGACCGACATCAGCAGAAGGATAGGGATCGATGATAGTGTTTGGGAGGAAAGTAGTCAAGACCAAAAAGTAGGAAAAATTTATGAAGGGTTGAAAGAAAAAAAGTTTTTGTTGATGTTGGATGATTTGTGGGAAAAGCTAGAACTTCAAGAGTTAGGTTTTCCAGTCCTGAAAGAAAGTAACAACAAATCGAAAGTAGTGTTCACAACACGCATCAAGGACGTATGTGCTAAAATGAAAGCTCAAAAGAAACTTGAAGTGAAATGTCTATCCGATGAAGAAGCGTTTGAATTGTTTCGTAGCAAATTAGGCGATGAGACATTAAATTGTCACACAGAGATCCCAAAGCTAGCCCATGAAATGGCTAAAAAATGTAGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCTGGAGTGGAAAGTTATGAAGCTTGGGAGGTTGCAAAAAATAATTTGAGTAGTTGTTCTTGGACAGCCGGAGATATTGTAAAAGTTTTTCGTACCCTCAAGTTTAGCTATGACAAACTTCCAGATAAGGCACATCAAAGCTGCTTCTTGTATTGTGCACTATACCCAGAAGATTATGAAATAGATGTTGATGAACTTATTGATCGATGGATTGGTGAGGGATTTCTTGATAAAGATGCTAAGAATGTATATGATATGTACAACCAAGGGAAATCTATAATTCAAAAATTACTACTTTCATGCCTATTAGAGGAGGATATTGAAATTCACCATCCGTTTTGGCATGGGAATAGTAATAGGAAAATTAAAATGCACGACATGATTAGAGATATGGCACTATGGTTAACTCGAGATGAAGATGAAAACAAAGACAAAATTGTAGTTCAAAGGGAAGCATCTTCAATGTCAGAAATGGATTCTAGAAGATTGAATGTTGTAGAGAGGATTTCAATAATAAACACTGACTGGAATTTAGAAGAAAGCTGGAAGGTACCAACTTGTCCAAATCTCATCACCCTTTGTTTAAATTTAGAAATGGATTTTGATGCCCCTGCTTTTTCATTAAATTTCCAATCCTTAAAAAAGCTGAGAGTGTTGGATTTATCATATAGTGATTCTTCTATCAATCTGCCCTCAGAAATAGGCGAGTTAATCAACTTGGAATTCCTTAACCTTTCCAAATCAGAAGTATTTACATTGCCTATTGCAATGAAGAAGTTGAAAAACTTGAGGGTATTTCTTATGGACAATGTGGCTAGTTGGAGTCATATAATTAAATCCATTTTGGAAGTGATAGAAAGTCTTGAACAATTAAAGGTGTTTAGATTTATTGCATCAGATGGATCCTCTAAAAGCGGCAGCACCATAGAAGAAGAGATATCATTACTAGAGAAGCTGGAATCATTACCAAAACTGGAGGAACTGAGTGTCTCATTAACAAACTTCGCTAGTGTGCAGACACTATTTCACTCAACCAAATTACGAGATTGCTCTAGAGGGCTTTGGATTTCTGAATTTAAAAGGTGGCAAAACTCACTTGAAATGTCTTCATTATTAACATCCATGTCGGAAATGATGCATTTGGACCTCATATATCTTTGGGGCATAAAAAGCCTCATGGATGCTTCATTGATTGCTGACAAATGCCATCTGGGCAAGCTTCGCCAAGTGCACATATATCATTGTTATTCAATAACTCATTTGACATGGTTGAGGTATGCTCCGCTTCTTGAGAAGCTTGTTGTTTCTTCTTGTAGTTCAATTGAAGAAGTGGTGAAAGAAGTTAAAGATGACGAGCAAGCTGACTATGACTCCAACAATGATATTATATTCAGAAATCTTAAAGTTCTTCGCCTTTCTAATATGTCTAAGCTAGTGAGCATCCACAAGAGAGCTTTGGATTTTCCTTCCCTAAAACGTATTAGGGTATTTGAGTGCCCCAATCTAAAGAAGCTTCCTTTCAATTCCAGCTTTACTTCCAAGAACAACTTGACTGTAATCCAAGGATCAACGAAGTGGTGGGACAATTTAGAGTGGGATGACACAATCATTCCAAGCTTACTACGTCCTAATTTTGAACCATTCATCATTCCAGATCCGGATGTTGGATTAATTATTTAA 2757 0.3758 MEALGVIWEVAKSLLSCTNAQAAYVYKLQENLESLNKIWDDLQNKEKDVLTEIERAESTRVMKRTKEVASWLQEFQKLQEKMMKDIPNFQEVQSNRCLNGYCPKNYVSSYKVGKKIVERLNEVNAMLSKVDKITQFAIQQPPKPVAEMPCGDTIGLDLMVNEVWNSLKDDNVGIIGLYGMGGAGKTTLMKRIQSELGKREHSFDLVLWAVVSKDCDTKKIMTDISRRIGIDDSVWEESSQDQKVGKIYEGLKEKKFLLMLDDLWEKLELQELGFPVLKESNNKSKVVFTTRIKDVCAKMKAQKKLEVKCLSDEEAFELFRSKLGDETLNCHTEIPKLAHEMAKKCRGLPLALITVGSAMAGVESYEAWEVAKNNLSSCSWTAGDIVKVFRTLKFSYDKLPDKAHQSCFLYCALYPEDYEIDVDELIDRWIGEGFLDKDAKNVYDMYNQGKSIIQKLLLSCLLEEDIEIHHPFWHGNSNRKIKMHDMIRDMALWLTRDEDENKDKIVVQREASSMSEMDSRRLNVVERISIINTDWNLEESWKVPTCPNLITLCLNLEMDFDAPAFSLNFQSLKKLRVLDLSYSDSSINLPSEIGELINLEFLNLSKSEVFTLPIAMKKLKNLRVFLMDNVASWSHIIKSILEVIESLEQLKVFRFIASDGSSKSGSTIEEEISLLEKLESLPKLEELSVSLTNFASVQTLFHSTKLRDCSRGLWISEFKRWQNSLEMSSLLTSMSEMMHLDLIYLWGIKSLMDASLIADKCHLGKLRQVHIYHCYSITHLTWLRYAPLLEKLVVSSCSSIEEVVKEVKDDEQADYDSNNDIIFRNLKVLRLSNMSKLVSIHKRALDFPSLKRIRVFECPNLKKLPFNSSFTSKNNLTVIQGSTKWWDNLEWDDTIIPSLLRPNFEPFIIPDPDVGLII* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0862 918 Coils Coil 25 45 - -
Mtr1g0862 918 PANTHER DISEASE RESISTANCE PROTEIN RP 13 897 IPR044974 GO:0006952
Mtr1g0862 918 PANTHER OS12G0491200 PROTEIN 13 897 - -
Mtr1g0862 918 Gene3D - 310 395 IPR042197 -
Mtr1g0862 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 411 IPR027417 -
Mtr1g0862 918 Pfam NB-ARC domain 159 397 IPR002182 GO:0043531
Mtr1g0862 918 Gene3D Ribonuclease Inhibitor 494 656 IPR032675 -
Mtr1g0862 918 SUPERFAMILY L domain-like 482 879 - -
Mtr1g0862 918 Gene3D Ribonuclease Inhibitor 661 884 IPR032675 -
Mtr1g0862 918 Gene3D - 139 309 IPR027417 -
Mtr1g0862 918 PRINTS Disease resistance protein signature 174 189 - -
Mtr1g0862 918 PRINTS Disease resistance protein signature 250 264 - -
Mtr1g0862 918 PRINTS Disease resistance protein signature 345 359 - -
Mtr1g0862 918 PRINTS Disease resistance protein signature 570 586 - -
Mtr1g0862 918 Gene3D - 396 492 IPR036388 -
Mtr1g0862 918 SMART AAA_5 171 312 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0862 Mtr-Chr1 9830029 9837641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0862 171 498 WRKY Transcription Factor Family AT5G45050 22.090 7.26e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0862 - K13459 mtr:MTR_4g091380 1243.02