Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0849 ATGAGTACCTTTCAGCAAGAGAAGTTTGTTAGGTTTCAGGATTCTAATGCAGAGGTTTCTCAGAGAAATTATCCTGCATTTAAGACAACACAGTCAGGGAGATTTAGAAGTACAATAAGTTCATTTTCTGAGAAGTTTCAAAGGGGACTTGAATCTGGTTCTGAGAGGATAAAGAGGTTCAGATCAACGTTTGACCATTATCACTATGACAATGCTCTTTCTCGAAATTTTGGTTCAAAAAGGAAAATCCTCGATCCGCAGGGTACCTTCCTTCAAAAGTGGAACAAGATATTTGTCTTGTTATGTGTTATTGCGGTATCATTGGATCCTTTGTTCTTTTATGTCCCTGTGATTGATGGTGAAAATAAATGCCTTTCACTGGACAGAGGGATGGAGATTACAGCCACTTTTTTGAGAACTTTCTCTGATGTTTTTTATATAATCCACATGATTTTCCAGTTTCGTACTGGATTCATTGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTTTGATCGATGATTCGTGGGTAATTGCTAAGAGGTATCTGTCATCATATTTCTTAGTTGACATTCTTGCGATTCTTCCACTCCCACAGGTGGTGATTCTAGTTATCATCCCAAAGATGAGCGGCTTTCAATCACTCAATACAAAGAACTTGCTGAAAGTTGTTGTTATCTTCCAATATGTGCCTCGTTTAATACGGATAATTCCATTATATAAAGAAGTTACAAGAACATCCGGCATTCTCACTGAAACAGCTTGGGCGGGAGCTGCATTCAATCTGTTACTTTACATGCTTGCAAGCCATGTCCTTGGTGCCTTTTGGTACTTGTTTTCCATAGAACGAGAAACCACATGCTGGCAAGAAGCGTGTCGAAGTAATATCATGTGTAACACGGCATATATGCATTGCAATCCTCGGGGAGGTTTTAAGTCTATTGCGAAATTCTTGAATGATTCTTGCCCAATACAGGAGGAAGATAAAAAACTATTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCTGGTGTTGTGGAGTCGAGAGATTTTCCCTCAAAACTCTTCTACTGTTTTTGGTGGGGCCTAAAAAATTTAAGTTCTCTTGGTCAGAACCTCGCAACAAGTACTGATTTTTGGGAAATCTGTTTTGCAATTTTCATTGCCATAGCTGGTTTGGTGTTATTTTCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACACAAACAAGATTGGAGGAGATGAGAGTAAAAAGGAGGGATGCAGAACAGTGGATGTCTCATAGATTGCTTCCTGACGACCTTAGAGAGCGAATCAGGCGGTATGATCAGTACAAATGGCAAGAAACTAGAGGTGTAAATGAAGACAATTTAGTTCGTGATCTTCCTAAAGATTTACGAAGGGACATTAAGCGTCATCTTTGCTTGGATTTGTTGATGAGGGTGCCAATGTTTGAGAAAATGGACGAACAACTTTTGGACGCAATGTGTGACCGTCTTAAACCAGTGCTTTACACAGAACAAAGCTATGTTGTCCGAGAAGGAGATCCCGTTGATGAGATGCTCTTCATAATGCGAGGCAAGCTATTGACCATAACAACTAACGGTGGACGAACCGGCTTCTTCAATTCCGAGTACTTAAAAGCCGGCGACTTCTGTGGAGAGGAGCTTCTCACATGGGCCTTAGATCCTCGTCCCTCATACAACCTTCCCATATCCACTAGGACAGTCAGAACAATCATAGAAGTTGAAGCCTTTGCGCTAAAAGCCGACGATCTGAAGTTTGTGGCGTCTCAATTCCGGCGCCTTCATAGCAAGCAGCTTCGCCACACTTTCAGATTCTACTCGCAACACTGGCGCACATGGGCTGCATGTTTTATACAAGCTGCATGGAGGCGCTACAGCAAAAAGAAACTTGAAGAGTCGCTCGATGAAGAGGAGAATAGACTGCAAGATGCATTGGCAAAGACTGGCGGTAACACAACAAGTTTAGGTGCCACCATATATGCTTCTAGGTTTGCTGCTAACGCACTCAGATTATTGCGACGAAGTCGCACCGCAAGGAAGACAAGGGCGCTAGAGAGAATGCCTGCTATATTGCTTCAGAAGCCTGAAGAACCTAACTTTACTGATGATGAACAATAG 2151 0.4166 MSTFQQEKFVRFQDSNAEVSQRNYPAFKTTQSGRFRSTISSFSEKFQRGLESGSERIKRFRSTFDHYHYDNALSRNFGSKRKILDPQGTFLQKWNKIFVLLCVIAVSLDPLFFYVPVIDGENKCLSLDRGMEITATFLRTFSDVFYIIHMIFQFRTGFIAPSSRVFGRGVLIDDSWVIAKRYLSSYFLVDILAILPLPQVVILVIIPKMSGFQSLNTKNLLKVVVIFQYVPRLIRIIPLYKEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERETTCWQEACRSNIMCNTAYMHCNPRGGFKSIAKFLNDSCPIQEEDKKLFDFGIFLDALQSGVVESRDFPSKLFYCFWWGLKNLSSLGQNLATSTDFWEICFAIFIAIAGLVLFSFLIGNMQTYLQSTQTRLEEMRVKRRDAEQWMSHRLLPDDLRERIRRYDQYKWQETRGVNEDNLVRDLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEQSYVVREGDPVDEMLFIMRGKLLTITTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRPSYNLPISTRTVRTIIEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQHWRTWAACFIQAAWRRYSKKKLEESLDEEENRLQDALAKTGGNTTSLGATIYASRFAANALRLLRRSRTARKTRALERMPAILLQKPEEPNFTDDEQ* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0849 716 Coils Coil 638 658 - -
Mtr1g0849 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 714 - -
Mtr1g0849 716 SUPERFAMILY Voltage-gated potassium channels 85 408 - -
Mtr1g0849 716 Pfam Ion transport protein 94 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr1g0849 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 714 - -
Mtr1g0849 716 CDD CAP_ED 486 617 IPR000595 -
Mtr1g0849 716 Gene3D - 90 410 - -
Mtr1g0849 716 ProSiteProfiles cAMP/cGMP binding motif profile. 486 569 IPR000595 -
Mtr1g0849 716 Gene3D Helix hairpin bin 412 477 - -
Mtr1g0849 716 SMART cnmp_10 486 617 IPR000595 -
Mtr1g0849 716 SUPERFAMILY cAMP-binding domain-like 415 608 IPR018490 -
Mtr1g0849 716 Gene3D Jelly Rolls 484 604 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0849 Mtr-Chr1 9609748 9616715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0849 3 715 Ion Channels AT5G53130 75.522 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0849 K05391 - gmx:100801032 1159.44