Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0843 ATGCAAAAAACGACCATGAAGAACATGAAACGACACTCATCGGAATCTTCTCTCCGACGAGTGGATTCTCCTGTTGGAGCCGTTACGAAGCTAGAGAATGTTCACCGGAGAAGGTTGAAAATTCGGAGAATGAAGTATAGTTGTCAAGCAAAGATCCACGTCGGAAATGGCTCCGATGACGGTGATCTGAAAACGGAGAATGCGCGACGAGAGATTCATGAATCTGTTGAGATATCGTTGTCGTTAGCAACTTCATCATCATCTGAGGAAGATGATCAGCTGTCCAAGCAAAACGGAGAGGTGAAGCATTATCAACAACAACAGCGACCTCTATCGTATGGTTCGGTGTCAACCATAGGCTGTAGGAAGGAAATGGAGGATGCGGTGAGTATGGAGATAGGTTTTACGATGAAGGATGGAGAGAAGTGTGATTTCTTCGGTGTTTATGATGGTCACGGTGGTGCTCAGGTGGCGGTGTCGTGTAGAGAGAGGTTGTATAGGATTGTGGCGGAGGAGGTTGAGATGTTTTGGGAGGATAGGGAATGGGATTGGGAGAGGGTGATGGAAGGGTGTTTTGGTAAAATGGATAGGGAGGTGGCGGGTGATGCCACGGTTAGGACCGTGGGATCCACGGCTGTTGTGGCGGTTGTTGTTAAAGAGGAGATTGTTGTTGCGAATTGTGGTGATTCTAGAGCCGTTTTGGGACGAGGTGGTGAAGTCGTGGAGTTGTCTTCTGATCATAAGCCAAACAGGCCTGATGAGTTGATGAGAATAGAAGAAGCTGGTGGAAGAGTCATAAACTGGAATGGCCACCGTGTTCTTGGTGTTCTTGCAACTTCACGATCTATAGGAGATCAATATCTTCGACCATATGTAATATCAAAACCTGAAGTCACCGTGACAAAACGAACCAATGAAGATGAATTTCTCATACTAGCAAGTGATGGCTTGTGGGGTGTAATGTCTAGTGAAATTGCATGCCAAGTTGTAAGAAAATGTTTCAAAGGCCAAATTAGGAGAGTTTGTCATGGGAATGAGAATCAAAGTAATCGTGCTGCTGAAGCTGCAACACTATTATCTGAGATAGCATTGGCAAAGGGTAGCAGAGACAATACAAGTGTCATAGTTGTTGACCTAAGAGGAACATTAAAATCTAGTTGA 1161 0.4505 MQKTTMKNMKRHSSESSLRRVDSPVGAVTKLENVHRRRLKIRRMKYSCQAKIHVGNGSDDGDLKTENARREIHESVEISLSLATSSSSEEDDQLSKQNGEVKHYQQQQRPLSYGSVSTIGCRKEMEDAVSMEIGFTMKDGEKCDFFGVYDGHGGAQVAVSCRERLYRIVAEEVEMFWEDREWDWERVMEGCFGKMDREVAGDATVRTVGSTAVVAVVVKEEIVVANCGDSRAVLGRGGEVVELSSDHKPNRPDELMRIEEAGGRVINWNGHRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNEDEFLILASDGLWGVMSSEIACQVVRKCFKGQIRRVCHGNENQSNRAAEAATLLSEIALAKGSRDNTSVIVVDLRGTLKSS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0843 386 Pfam Protein phosphatase 2C 113 372 IPR001932 -
Mtr1g0843 386 PANTHER ALPHABET, ISOFORM E-RELATED 77 382 - -
Mtr1g0843 386 SMART PP2C_4 108 377 IPR001932 -
Mtr1g0843 386 ProSiteProfiles PPM-type phosphatase domain profile. 112 379 IPR001932 -
Mtr1g0843 386 Gene3D - 104 384 IPR036457 -
Mtr1g0843 386 MobiDBLite consensus disorder prediction 80 109 - -
Mtr1g0843 386 CDD PP2Cc 112 379 IPR001932 -
Mtr1g0843 386 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g0843 386 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Mtr1g0843 386 SUPERFAMILY PP2C-like 100 380 IPR036457 -
Mtr1g0843 386 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 77 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0843 Mtr-Chr1 9566771 9569830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0843 66 380 PP2C-type Phosphatase Gene Family AT2G29380 48.649 5.08e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0843 K14497 - gmx:100807235 470.314