Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0841 ATGTCTTGGAAAATTCTTGTTAATCTAATTGTTTTGATGATCCTCCTATTCCCTCTTCCTTGCCTAACAGAAACAAATGACCAATGTCTCCCTTCATCTTGTGGCAACATACAAAACATCACTTACCCTTTTCGTCTACAAACCGATCCCGAAAACTGTGGTGATCCAAATTATGAACTTTCCTGTGAGAACAATCAAACAATACTAAATCTATACAATGGAAAATACTTTGTAGAATCCATCAACTACAAAAATTCCACAATAAGGATCATAGATTCAGGTCTGAACAAAGAAAATTGCTCTTCAATTCCTCTATACACTTTAACAAATGAAAACTTCACCACTGATAAACCTTATAGCTTGTTAGATACTAATAACTTAGAAACCATAGCATTTATAAGCTGTGCAGCTTCAATTAATTCTCCACTTTACATGGATACTTCATCTTGTAACAAAGGATTGATCAACTCTTCCAATTATGCTGTACTTGGTGACTTGAAAATCTCTGAGTTGGAGGATTCATGCAGCATACTAGTCATGGTTGTTACAACTTCAAAATTGAACAACAGTGGCAAAAACTTTTCGTATGTGAATATTCATCAGCAACTTGTTTATGGATTGGAGCTTTCTTGGCATGAGATATTCTGCAAAGAGTGTCAAGGTAGAGGTTACTGTAAGTTGAATAACAACAATGAGGTCATCGGTTGTTCAAGTAGTAGACCTTGCAGTCATGACTATATACCGTCTTTTAAATGTGCTTTAAAAGAGCTAATCCATACAGTCAAAGATCTGACTAAAGGTTCTCACTTATTAGGCGCTCTCATCGGAATAATTCTTCTGATAAGAATCATGGGTGGTTTACTATTTATCCCGATGTACATGGCATATAAATGGAGAAGGAGGCATTTATCGGCATATGATTCAGTTGAAGAGTTTCTTAAATCTCACAATAATCTCATGCCAATAAGATACTCTTACTCAGACATTAAAAAAATGACAAAAGGATTTAAGGATAAACTTGGCGAAGGTGGCTATGGTTCTGTTTACAAAGGACAACTTCGCAACGGTCACCTAGTCGCAATCAAGTTGCTAGGTGGAAAGTCAAGAGCAAATGGACAGGAATTCATCAATGAAGTTGCTACGATTGGAACGATTCACCATGTTAACGTGGTTCACCTAATTGGCTTTTGTGTTGAGAAAACAAAAAGAGCACTTGTTTATGAGTTCATGCCTAATGGTTCTCTTGAAAAGCACATTTTCTCAAGAGAAAGAATGGGTTCTTTGAGTTCTGAGAAAATGTTTGATATAGCTCTTGGTGTAGCCCGTGGTATTGAATATCTACATAGAGGGTGTGACATGAGGATTTTGCATTTTGACATAAAGCCTCATAACATTCTTCTTGACGTAAACTTCACTCCAAAGGTTTCAGATTTTGGACTAGCAAAGTTATATCCAACGGACAATAGCATTGTGTCTCTTACAGCTGCAAGAGGAACTATGGGATACATGGCACCAGAATTGTTCTATAAGAATATTGGAGGAGTATCGTACAAAGCAGATGTTTATAGCTTTGGAATGTTGTTAATGGAAATGGCGAGTAGGAGAAGGAACATGAATGAGAGTGAAGATCATAAGAGTCAAGTTTATTTCCCTTCTTGGGTTTACGACCAATTTAGCGAAGGGAAGGAAATAGAAATGGGGAATGGTACAGAAGAGGAGGAGAAGATACTGAAGAAGATGATAATAGTTGCATTATGGTGTATACAGATGAAACCAATTGATCGTCCTTCGATGAACAAAGTGGTTGAGTTACTTGAAGGAGATGTCGAGTCCTTGGAAATGCCTCCTAAGCCATTTCAAACTCCAAAAGGAATGCCTGTACAAGGAATTGGACAACTCAGAAATCTACCTTGGCTGCTACCTGGAGATTCTACAAACTCGCTTACCATTGTTATAAATCGACGTTAA 1968 0.372 MSWKILVNLIVLMILLFPLPCLTETNDQCLPSSCGNIQNITYPFRLQTDPENCGDPNYELSCENNQTILNLYNGKYFVESINYKNSTIRIIDSGLNKENCSSIPLYTLTNENFTTDKPYSLLDTNNLETIAFISCAASINSPLYMDTSSCNKGLINSSNYAVLGDLKISELEDSCSILVMVVTTSKLNNSGKNFSYVNIHQQLVYGLELSWHEIFCKECQGRGYCKLNNNNEVIGCSSSRPCSHDYIPSFKCALKELIHTVKDLTKGSHLLGALIGIILLIRIMGGLLFIPMYMAYKWRRRHLSAYDSVEEFLKSHNNLMPIRYSYSDIKKMTKGFKDKLGEGGYGSVYKGQLRNGHLVAIKLLGGKSRANGQEFINEVATIGTIHHVNVVHLIGFCVEKTKRALVYEFMPNGSLEKHIFSRERMGSLSSEKMFDIALGVARGIEYLHRGCDMRILHFDIKPHNILLDVNFTPKVSDFGLAKLYPTDNSIVSLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNMNESEDHKSQVYFPSWVYDQFSEGKEIEMGNGTEEEEKILKKMIIVALWCIQMKPIDRPSMNKVVELLEGDVESLEMPPKPFQTPKGMPVQGIGQLRNLPWLLPGDSTNSLTIVINRR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0841 655 Gene3D Transferase(Phosphotransferase) domain 1 410 619 - -
Mtr1g0841 655 SUPERFAMILY Protein kinase-like (PK-like) 315 605 IPR011009 -
Mtr1g0841 655 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Mtr1g0841 655 SMART serkin_6 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0841 655 ProSiteProfiles Protein kinase domain profile. 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0841 655 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 273 626 - -
Mtr1g0841 655 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 9 261 - -
Mtr1g0841 655 PANTHER RUST RESISTANCE KINASE LR10-RELATED 273 626 IPR045874 GO:0004672
Mtr1g0841 655 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 261 IPR045874 GO:0004672
Mtr1g0841 655 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Mtr1g0841 655 Pfam Protein kinase domain 337 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0841 655 CDD STKc_IRAK 340 607 - -
Mtr1g0841 655 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Mtr1g0841 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0841 Mtr-Chr1 9552716 9556033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0841 10 618 Receptor kinase-like Gene Family AT5G38260 35.118 6.13e-110 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0841 Pkinase 6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0841 - - hbr:110637493 701.049