Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0840 ATGTGTATTATTTTGCCACTGGTAATAGATATTAAATTAATCGTGACCAACTATATGATATGTATTGTAGGACTGAATAAGTTTACAGGGAAGAATAAGTTCGAGGAAGAAAAACCAAATAGGTATTATCTATACGAAGTTGGATTTGTTACAGGAAGGTATGTTGTGCCATACTTTACACTTAGAATTACATTGGGAATCATACTTTTCTCTGCGTTGTTGATCTATAAATATCGAAGAAGACATGTATCAATATATGAAAATATCGAAGATTTTCTGCAAGGCAATACACTCATGCCAATAAGGTATTCATACAAAGAGATAAAGCAGATGACAAAAAATTTCAAAGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAGAGGAAATCTAATAAGTGGGCCATTTGTAGCCATAAAGATGTTGAAAATTAAATCGAAAACCAATGGGCAAGATTTCATAAGTGAAGTTGCAACTATAGGAAGAATATATCATTCAAATGTGGTAAGACTCATTGGGTTTTGTGTCGAAGGATCGAAACGCGCTCTTGTTTACGAGTACATGCCCAATGGCTCACTTGATAAATATATTTTCAACAAAGAGGGAGTTATATCTCTAACTAACGACCAAATATATGAGATATCTCTTGGAGTGGCTCGTGGAATTTCATATCTTCATCAAGGCTGTGGTATGCAAATTTTGCATTTTGATATTAAGCCTCACAACATTCTTCTTGACGAAAATTTTGTCCCTAAAGTTTCGGACTTTGGTCTTGCAAAGCTTTATCCTATTGACAAAAGCATTGCCACCTTGACAGCAGCAAGAGGAACAATCGGTTACATGGCTCCTGAATTGTTCTACCAAAATATCGGAGGAATATCATACAAGGCTGACATGTATAGCTTTGGAATGCTTTTGATTGAAATGGCAAGTAGAAGAAGAAATTTGAATACACATGCTGAGCATTCAAGTCAACTTTACTTTCCCTTTTGGATTTATGATCAGCTGTCTGAAAATAGAGAAAGAGAAATGGAAGATGTTATCATGGAGGAAATCAATGATGTTTTGAAGAAAATGTTCCTAGTTGCACTTTGGTGTATACAGTTGAAACCCATTGATCGTCCTTCAATGAACAAAGTAGTAGAGATGCTTGAAGGAGATATTGAAAATATTGAAATACCTCCAAAGCCTTTACTATATCCACATGAAACAATTCAAGAGAATCTTGATACCAACTCAAATGAAACAGAATCAGATACAGGCTCTACCAGTTATGTGGAGGAAATTGCATCCAATACTTTATTGAAGTGTTCAGCTTGA 1323 0.3492 MCIILPLVIDIKLIVTNYMICIVGLNKFTGKNKFEEEKPNRYYLYEVGFVTGRYVVPYFTLRITLGIILFSALLIYKYRRRHVSIYENIEDFLQGNTLMPIRYSYKEIKQMTKNFKVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSKTNGQDFISEVATIGRIYHSNVVRLIGFCVEGSKRALVYEYMPNGSLDKYIFNKEGVISLTNDQIYEISLGVARGISYLHQGCGMQILHFDIKPHNILLDENFVPKVSDFGLAKLYPIDKSIATLTAARGTIGYMAPELFYQNIGGISYKADMYSFGMLLIEMASRRRNLNTHAEHSSQLYFPFWIYDQLSENREREMEDVIMEEINDVLKKMFLVALWCIQLKPIDRPSMNKVVEMLEGDIENIEIPPKPLLYPHETIQENLDTNSNETESDTGSTSYVEEIASNTLLKCSA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0840 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Mtr1g0840 440 Gene3D Transferase(Phosphotransferase) domain 1 189 394 - -
Mtr1g0840 440 PANTHER RUST RESISTANCE KINASE LR10-RELATED 35 416 IPR045874 GO:0004672
Mtr1g0840 440 SUPERFAMILY Protein kinase-like (PK-like) 98 386 IPR011009 -
Mtr1g0840 440 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Mtr1g0840 440 Pfam Protein kinase domain 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0840 440 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 35 416 - -
Mtr1g0840 440 SMART serkin_6 113 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0840 440 ProSiteProfiles Protein kinase domain profile. 113 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0840 440 Gene3D Phosphorylase Kinase; domain 1 89 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0840 Mtr-Chr1 9549932 9551608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0840 65 425 Receptor kinase-like Gene Family AT5G38260 48.108 3.37e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0840 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0840 - - mtr:MTR_1g028170 697.197