Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0838 ATGTCACTCACAATACTATCACTGCTGCTGATGCTGCTAATGAACCTTCAAAATGGTAAGAGTGATGCTTCCATTCGATGTCCCTTCAATCTCAACTGTACAAATAATAACATGAAGATTATTGAAATTCCTACTTATCCAGTCCCTATAAAATTCAACATCAGTGACATTAATTACGAATTGCGAACAATAAAACTATCTGATCCTGGAAACTGTCTTCCACAACTCTTACTTGACCGCAATTTTTCATCAAATTTTCCTTTTAAGGATTATCATAGCTATGAATTTCCTCGACAATTCGATGTTAGTTTCTTCAATTGTTCTTCAGTAGTACAACTGATCAGGAGCAGTAATCTAATGCAACATCACGGAACACAAGACATCATATCTTGCCCAATTTATGTCGTTGATTCAGATCAAGAAACTATCGTTGAATCTGACGTATTAGTATACTGCACCAAACTGTTTGACCGTGTTTCTCCATTTTCTGCATATAGCATTCAAGACAACCGTCTCTTATTGACATGGTCAGGAACAAATTTTGACATAGGATGCTTGAAATGTAAACATAAATCAAAGAAGACAACATTAGTAATTTTATTCTCTGCAGGTGGAATCATCGGTTCAACTTTGCTATTACTTGTTCTCGGCACCATTGTTCGAATTTATCGCTATTTCAAGATGAAAGGCGAAGATCATGTAAGAATCGAAAACTTTTTGAAGGATTATAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATTACAAACAAATTTAAGGATAAGATCGGAGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTGTCAAGCCAAATTCTCGTTGCCGTTAAGATGCTCAATAACACTGAGGGAGATGGTAAGGAGTTCATAAATGAAGTGGGAACTATGGGAAAAATCCATCATCTTAATGTTGTCCGTTTGCTTGGCTTCTGCGCTGATGGATTTTACCGCGGTTTAGTCTACGATCTTTTTCCAAGTGGTTCTTTGCAGAAATTTCTTTCTCCACCAAACAACAAAGATGCTTTTCTTGGATGGGACACGCTGCAACAAATTGCTCTAGGCATAGCCAATGGAATTGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAATGTCTTGTTAGATGAGAATTTCACTCCCAAAATTACAGACTTCGGTTTGGCTAAGATGTGCTCGAAAAATCGAAGTACAGTGTCTATGACCGCAGCCAAAGGAACGTTAGGCTACATGGCACCCGAAGTTTTTTCTAGAAACTTCGGGAATGTCTCATATAAGTCTGATATATATAGTTATGGTATGTTGTTGTTGGAGATGGTTGCAGGAAGAAAGAATACAAACACAACCACAGGTGAAGAAAATTTACAAGTTCTATATCCAGATTGGATCCACGATTTGCTTGAAGGGGGAGACATACAAATCCCTATTGACGAAGAGGGAGATTTCAGGATTCCAAAAAAAATGGCGATTGTTGGACTTCGGTGCATCCAGTGGCAACCTATGCATCGTCCATCCATGAAAACTGTGATACAAATGCTACAAGGTGATGGAGACAAGTTAAAAGTCCCCAGCAATCCTTTTGGGCCTACAACTTCAACTAATTCAACTGCTAGTACTGTTACAAAGCGTATAAATTTCGAGCTAGAAGTTATTCAAGAATTAGATTAA 1725 0.378 MSLTILSLLLMLLMNLQNGKSDASIRCPFNLNCTNNNMKIIEIPTYPVPIKFNISDINYELRTIKLSDPGNCLPQLLLDRNFSSNFPFKDYHSYEFPRQFDVSFFNCSSVVQLIRSSNLMQHHGTQDIISCPIYVVDSDQETIVESDVLVYCTKLFDRVSPFSAYSIQDNRLLLTWSGTNFDIGCLKCKHKSKKTTLVILFSAGGIIGSTLLLLVLGTIVRIYRYFKMKGEDHVRIENFLKDYKALKPTRFSYADIKRITNKFKDKIGEGAHGAVYKGKLSSQILVAVKMLNNTEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFYRGLVYDLFPSGSLQKFLSPPNNKDAFLGWDTLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLLDENFTPKITDFGLAKMCSKNRSTVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVAGRKNTNTTTGEENLQVLYPDWIHDLLEGGDIQIPIDEEGDFRIPKKMAIVGLRCIQWQPMHRPSMKTVIQMLQGDGDKLKVPSNPFGPTTSTNSTASTVTKRINFELEVIQELD* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0838 574 Gene3D Phosphorylase Kinase; domain 1 236 335 - -
Mtr1g0838 574 SUPERFAMILY Protein kinase-like (PK-like) 245 532 IPR011009 -
Mtr1g0838 574 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 573 IPR045874 GO:0004672
Mtr1g0838 574 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Mtr1g0838 574 Pfam Protein kinase domain 264 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0838 574 Gene3D Transferase(Phosphotransferase) domain 1 336 541 - -
Mtr1g0838 574 ProSiteProfiles Protein kinase domain profile. 261 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0838 574 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0838 Mtr-Chr1 9530682 9532827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0838 191 569 Receptor kinase-like Gene Family AT1G66910 42.065 1.09e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0838 PK_Tyr_Ser-Thr 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0838 - - adu:110273083 650.973