Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0837 ATGGTTTCAACCTCTAACTTTGGAGTAAAAGCCAGATATGCAAGAGGTGTGATAGTATTTCTTTACTTGTTTCTACTTCCACACAAAACTTATTCACAACCTTGTTCTTCTTCCTGTGGAAAAATTTCCAACATAACTTATCCATTCCGACTAAAACACGACCCAGACCACTGTGGCAACAATTTGTACGAGTTGAATTGTCTAAACAACGTTACAGTATTGAAGCTGTATGATGCTGAATATTTGGTGCAATCAATCAATTACAACAATTACACAATACGAGTTGTTGACCCAAACATTCAACCTACCAACTGCTCCTCTCTCCCTCACTTCTTCTTATACAGAAACAATTTTACCCAAAAAGATACTAATTCATACAAATACAGCTTCCGTCGATCGAATTCCACGTTTGATTATTCCGATAGAATTGATTTATCCAGGCCTGTAATTTACCTGAAGTGTACAAGTCCACCTAGTAACGTTGTGGATAAATATTATACGGATACAACTTCATGCCTGGATGAACACACATATGTTATTGTCGGGGACCCACAACTTGGAATATTGCAGCCTCAATGCCGTGTTAAGCTTGTTACTCTCACATCCTTCTGGGTTCCACCACCATCTGTATTTAGCATCAACAACATTATAGGCAACGTTTCATACATAGATATTCATAAGGCACTAGGCTATGGATTTGAAATTTCCTGGATGCAAGCCTCTTGTCGTTGTGATTATTGCTACCTCAAGGACCCTACTAGCGAGATTCAGTGTTACGACTTCTACTCACGGTGGATGTATCTGGCCGACATTCTGTTTGGTTTTGTCGTTGGCATTATTCGAGGACTTCGTGAGCTAGCAGGCATGAATAATAATTCGGACTATGTTAATATTGGCGGTGAATATGTTGGAGCATTTACAGGAAGGTATGTTCTGCCATGGATTACAGTTAGAATTATGTTGGGCATCATACTTTTCTCTGCGTTGTTGATCTATAAATATCGAAGAAGACATGCATCAATATATGAAAATATCGAAGATTTTCTGCAAAATAATACACTCATGCCAATAAGGTATTCATACAAAGAGATAAAGCAGATGGCAAAAGGTTTCAAGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAAAGGAAATCTAATAAGTGGTCCATTTATAGCCATAAAGATGTTGAAAATTAAATCAAAAACTAATGGGCAAGATTTCATAAGTGAAGTTGCAACCATAGGGAGAATATACCATTCAAATGTGGTAAGACTCATTGGGTTTTGTGTCGAAGGATCAAAACGCGCTCTTGTTTACGAGTACATGCCCAAAGGCTCACTTGATAAATATATTTTCAACAAAGAGGGAGTTATATCTCTTACTAACGACCAAATATATGAGATATCTCTTGGAGTGGCTCGTGGAATTTCATATCTTCATCAAGGGTGTGATATGCAAATTTTGCATTTTGATATTAAGCCTCACAACATCCTTCTTGACGAAAATTTCATCCCTAAAGTTTCAGATTTTGGTCTTGCAAAGCTTTATCCTATTGACAATAGCATTGTCGCTTTGACAGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAATTGTTCTACCAAAATATTGGGAGAATATCACACAAGGCCGATGTGTATAGTTTTGGAATGCTTCTGATTGAAATTGCAAGTAGGAGTAGAAATTTGAATTCACATGCTGAGCATTCAAGCCAACTTTATATCCCCTTTTGGATTTATGATCAATTGGTTAAAAATACAGTGACAGAAATGGAAGATGTGATTATGGAGGAAATTAATGATGTTTTGAAGAAAATGTTCATAGTTGGATTATGGTGTATACAGTTGAAACCCATTGATCGTCCTTCAATGAAAAAAGTAGTAGAGATGCTTGAAGGAGATATTGAAAATATGGAAATGCCTCCAAAGCCTTTGTTATATCCACATGAAACAATTCAAGAGAATCTTGATAGTAACTCAAATGAAACTGAATCAGATTGGCCAACCAGTTATTCGGAGGAAATTGTAACCAATCCTTTACTGAAGTAA 2079 0.3684 MVSTSNFGVKARYARGVIVFLYLFLLPHKTYSQPCSSSCGKISNITYPFRLKHDPDHCGNNLYELNCLNNVTVLKLYDAEYLVQSINYNNYTIRVVDPNIQPTNCSSLPHFFLYRNNFTQKDTNSYKYSFRRSNSTFDYSDRIDLSRPVIYLKCTSPPSNVVDKYYTDTTSCLDEHTYVIVGDPQLGILQPQCRVKLVTLTSFWVPPPSVFSINNIIGNVSYIDIHKALGYGFEISWMQASCRCDYCYLKDPTSEIQCYDFYSRWMYLADILFGFVVGIIRGLRELAGMNNNSDYVNIGGEYVGAFTGRYVLPWITVRIMLGIILFSALLIYKYRRRHASIYENIEDFLQNNTLMPIRYSYKEIKQMAKGFKVKLGEGGYGDVYKGNLISGPFIAIKMLKIKSKTNGQDFISEVATIGRIYHSNVVRLIGFCVEGSKRALVYEYMPKGSLDKYIFNKEGVISLTNDQIYEISLGVARGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVALTAARGTIGYMAPELFYQNIGRISHKADVYSFGMLLIEIASRSRNLNSHAEHSSQLYIPFWIYDQLVKNTVTEMEDVIMEEINDVLKKMFIVGLWCIQLKPIDRPSMKKVVEMLEGDIENMEMPPKPLLYPHETIQENLDSNSNETESDWPTSYSEEIVTNPLLK* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0837 692 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Mtr1g0837 692 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 24 672 - -
Mtr1g0837 692 Pfam Protein kinase domain 373 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0837 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Mtr1g0837 692 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 672 IPR045874 GO:0004672
Mtr1g0837 692 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Mtr1g0837 692 Pfam Wall-associated receptor kinase galacturonan-binding 35 97 IPR025287 GO:0030247
Mtr1g0837 692 SUPERFAMILY Protein kinase-like (PK-like) 354 642 IPR011009 -
Mtr1g0837 692 Gene3D Phosphorylase Kinase; domain 1 344 444 - -
Mtr1g0837 692 SMART serkin_6 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0837 692 ProSiteProfiles Protein kinase domain profile. 369 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0837 Mtr-Chr1 9512621 9523196 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0837 23 672 Receptor kinase-like Gene Family AT5G38260 33.921 2.76e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0837 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0837 - - cam:101508554 1004.2