Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0836 ATGTCTCTCCCCAAACCATATGTTACCCTATTGTTATCAATAACTACAAAAATGGTAACCTTTACAAATATTTTGGTGGTCATGATTCTCATCTTGCTTTGTAATTGCAACTTAGGTATGTGCCAAGTTAATGGTTGTAGTCGGAAGGATTTTAGGTGCGGACGTCACGGCCCGCCAATCCGATTTCCCTTCCGACTTAACGACAGAGAAACAGAATATGGATGCAGTTATACCGGCTTTAATCTTAGTTGTTCAGACACGCAGAAAACTCTACTTGAGCTTCATCCACATTCTGGTCCAATTCAACTCGAAGTCACAGCAATAGATTATCAATTACAACAATTACAAGTATCTGACCCTGAAAATTGCCTTCCAAGACAGTTTTTAAAGCTTCTTCATTCACAAATTTCACCTTTTCAATTATTTTCGAGATCCGACTACAATTATAGCTACACTTTCATGGATTGTAGTTCATTATCCTGCCCGGTTTATGTTGCTGATTCTAGTAATACACTCCTTGCTTTGGGTTTGGACCCAATACTCTGCACCAAGACTTTAGATATTCTTTCTTCATCGTTGTCCTTGCGATATGATAATATTTTGGTTATGACATGGTCAAAACCCAATTGTAGCAAGTGTGAAATAGAAGGGAAGATGTGTAAACTGAAAAACAATGGAACTGAAGACGAGATAGAATGTTTTGACCGTCATCACAAACCAACTAAAAAGATACTTCTATATGCCACAGTTGTGTTCGTAGGTTCAGTTATGGTAACACTGATTATTGCAGCCTGTTTGCATCTCTATAGCTATTTTAAACTGAAAGGTGAAGATGAGACTAGAATCGAAAAGTTCTTAGAGGATTACAGGGCACTCAACCCTGCAAGATTCTCTTATGCTGATATAAAGAGGATTACAAATAATTTTAGGGAAGAGTTAGGTGAAGGAGCTCATGGTGCAGTTTTCAAAGGTAAATTATCTAATGAAATTCTTGTGGCTGTGAAGATGCTTAAAAACACCGAGGGCGATGGAAAAGAGTTCATTAACGAAGTGAAAGCTATGGGAAAAATTCATCACATCAATGTTGTTCGCTTGGTTGGATTTTGCGCCGATGGATCCTACCGTGCTCTTGTTTATAATTTCTTTCCAAATGGTTCGTTACAGAACTTCATAACCCGACCTGATGATATGGACCATTTTCTCGGATGGGAGAAGCTACAACAAATTGCTCTTGGCATAGCCAAAGGTATTGAGTATCTTCACATGAGTTGTGATCAGCAAATTCTTCACTTCGATATTAATCCCCATAACGTGCTATTAGATGACAAGTTTGTTCCAAAAATTACTGATTTTGGTTTGGCGAAATTGTGTTCTAAAAATCAAAGCAAAGTGTCAGTAACTGCCGCAAGAGGGACTTTAGGTTACATTGCACCTGAAGTGTTTTCGAGGAACTTTGGAAATGTATCGTATAAAGCTGACATATATAGTTATGGGATGTTACTGCTTGAAATGGTTGGAGGAAGAAAAAATATAGGTCAGTTGTCTGAGGAAAATATTCAAGTTCTATATCCAGAATGGATTCACAATCTACTTGAAGGCCGAGATATTCACGTAAATATTGAAGGAGCAGAAGATGATAGAATTTTAAAGAAACTCGCAATCGTAGGACTATGGTGCATACAGTGGAATCCAATAAATCGTCCATCTATAACAGTTGTGCTCAAAATGTTAGAGGCTCTAGAAGAAGAAAACTTGATTGTTCCCCCAAACCCTTTTAACTCGACGACGTCCAGAGTTGTGGAAACCAAAACAAAATTTTCAACCTTAGAGTTGGAAGCTATACATGAATGA 1851 0.3782 MSLPKPYVTLLLSITTKMVTFTNILVVMILILLCNCNLGMCQVNGCSRKDFRCGRHGPPIRFPFRLNDRETEYGCSYTGFNLSCSDTQKTLLELHPHSGPIQLEVTAIDYQLQQLQVSDPENCLPRQFLKLLHSQISPFQLFSRSDYNYSYTFMDCSSLSCPVYVADSSNTLLALGLDPILCTKTLDILSSSLSLRYDNILVMTWSKPNCSKCEIEGKMCKLKNNGTEDEIECFDRHHKPTKKILLYATVVFVGSVMVTLIIAACLHLYSYFKLKGEDETRIEKFLEDYRALNPARFSYADIKRITNNFREELGEGAHGAVFKGKLSNEILVAVKMLKNTEGDGKEFINEVKAMGKIHHINVVRLVGFCADGSYRALVYNFFPNGSLQNFITRPDDMDHFLGWEKLQQIALGIAKGIEYLHMSCDQQILHFDINPHNVLLDDKFVPKITDFGLAKLCSKNQSKVSVTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMVGGRKNIGQLSEENIQVLYPEWIHNLLEGRDIHVNIEGAEDDRILKKLAIVGLWCIQWNPINRPSITVVLKMLEALEEENLIVPPNPFNSTTSRVVETKTKFSTLELEAIHE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0836 616 Pfam Wall-associated receptor kinase galacturonan-binding 46 119 IPR025287 GO:0030247
Mtr1g0836 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 35 616 IPR045874 GO:0004672
Mtr1g0836 616 ProSiteProfiles Protein kinase domain profile. 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0836 616 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Mtr1g0836 616 Gene3D Phosphorylase Kinase; domain 1 282 381 - -
Mtr1g0836 616 PANTHER RECEPTOR-LIKE KINASE 35 616 - -
Mtr1g0836 616 SUPERFAMILY Protein kinase-like (PK-like) 289 578 IPR011009 -
Mtr1g0836 616 Pfam Protein kinase domain 310 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0836 616 Gene3D Transferase(Phosphotransferase) domain 1 382 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0836 Mtr-Chr1 9505686 9509472 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0836 279 591 Receptor kinase-like Gene Family AT1G66980 49.221 4.00e-96 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0836 Pkinase 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0836 - - aip:107619931 682.174