Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0835 ATGGTTTCAACCACTATTTTTGGACGAAAAACCAGTTATGCAAGATGTGTGATAGTATTTCTTTACTTGTTTCTACTTCCACACAAAACTTATTCACAACCTTGTTCTTCTTCCTGTGGAAAAATTTCCAACATAAATCATCCATTCCGACTAAAACACGACCCAGACCACTGTGGCAACAATTTGTACGAGTTGAATTGCGTAAACAACGTTACAGTATTGAAGCTGTTTGATGCTGAATATTTTGTGCAATCAATCAATTACAACAATTACACAATACGAGTTGTTGACCCTAATATTCAACCCAACAATTGCTCCTCTCTCCCTCGCTTCTTCTTATACCGCACCAATTTCACTTATTATACTAATTCATACGAATACAGCTTACTTCGATCAAGTTCTTACGATGGAATTGATTTATCTTCCACCTCTTATGTTTTCGATGGAATTGATTTATCTAGGCCTGTAATTTACATGAACTGTACAAGTCCACCTAGTAACAATGTGAATATGTATTATACGGATACATCTTCTTGCATGGGTCAACACAACATATATGCTATTGTTGGGGACCCACAACTTGGAATATTGGAGCCTCAATGTCGTGTTAAGCTTGTTACTCTCACATCCTTCTGGGTTCCACCACCTGTATTTAGTATCAACAACATTATAGGCAATGTGTCATACATCGATATTCATAAGGCACTAGGCTATGGATTTGAAATTTCCTGGATACTAGCCTTTTGTCCTTGTGATCATTGCTACCTCAAGGACCCTGCCGGCGACATTCTGTGTTACGACCCCAAACCCAACTGTACCAATTGCTCACGTTGGTGGATGCATCTGGCCTTCATTCTATATGATTTTGTCTCAGGCATTTATCAAGGACTTTGTGAGCTAGCAAGCATCAAATTTGATTGGGAATATAATTATAATTATGCAAACAAAGTTGGAATAGTCACAGGAAAGTATGTTTTGCCATACATTGCAGTTAGAATTATGTTGGGCATCATACTTTTCTCTGCGTTATTGATCTATACATATCGAAGAAGACATGCATCAATATATGAAAATATCGAAGATTTTCTGCAAAGTAATACACTCATGCCAATAAGGTATTCATACAAAGAGATAAAGCAGATGACAAAAGGACTCAAGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAGAGGAAATCTAATAAGTGGGCCCTTTGTAGCCATAAAGATGTTGAAAATTAAATCAAAAACTAATGGCCAAGATTTCATAAGTGAAGTTGCAACCATAGGGAGAATATACCATTCAAATGTGGTAAGACTCGTTGGGTTTTGTGTCGAAGGATCAAAACGCGCTCTTGTTTACGAGTACATGCCCAATGGCTCACTTGATAAATATATTTTCAACAAAGAGGGAGTTATATCTCTATCTAACGACCAAATATATGAGATATCTCTTGGAGTGGCTCGCGGAATTTCATATCTTCATCAGGGTTGTGATATGCAAATTTTGCATTTTGATATTAAGCCTCACAACATCCTTCTGGACGAAAATTTCATCCCTAAAGTTTCGGACTTTGGTCTTGCAAAGCTTTATCCTATTGACAAAAGCATTGCCACTTTGACGGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAATTGTTCTACCAAAATATTGGGAGAATATCACACAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATTGAAATCGCAAGTAGAAGAAGAAATTTGAATTCACATGCTGAGCATTCAAGTCAACTTTATTTCCCCTTTTGGATTTATGATCAATTGGTTAAAAGTACAGTGAGAGAAATGGAAGATGTGATTATGGAGGAAATTAATGATGTTTTGAAGAAAATATTCATAGTTGCACTTTGGTGTATACAGTTGAAACCCGTTGATCGTCCTTCAATGAACAAAGTAGTAGAGATGCTTGAAGGAGATATTGAAAATATTGAAATGCCTCCAAAGCCTTTGCTATATCCACACGAAACCAATCAAGATAATCTTGATAGCAACTCAAATGAAACTGAATCAGATTGGTCAACCAGTTATGTGGAGGAAATTGTAACTAATCCTTTACTGAAGTAA 2121 0.3678 MVSTTIFGRKTSYARCVIVFLYLFLLPHKTYSQPCSSSCGKISNINHPFRLKHDPDHCGNNLYELNCVNNVTVLKLFDAEYFVQSINYNNYTIRVVDPNIQPNNCSSLPRFFLYRTNFTYYTNSYEYSLLRSSSYDGIDLSSTSYVFDGIDLSRPVIYMNCTSPPSNNVNMYYTDTSSCMGQHNIYAIVGDPQLGILEPQCRVKLVTLTSFWVPPPVFSINNIIGNVSYIDIHKALGYGFEISWILAFCPCDHCYLKDPAGDILCYDPKPNCTNCSRWWMHLAFILYDFVSGIYQGLCELASIKFDWEYNYNYANKVGIVTGKYVLPYIAVRIMLGIILFSALLIYTYRRRHASIYENIEDFLQSNTLMPIRYSYKEIKQMTKGLKVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSKTNGQDFISEVATIGRIYHSNVVRLVGFCVEGSKRALVYEYMPNGSLDKYIFNKEGVISLSNDQIYEISLGVARGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDKSIATLTAARGTIGYMAPELFYQNIGRISHKADVYSFGMLLIEIASRRRNLNSHAEHSSQLYFPFWIYDQLVKSTVREMEDVIMEEINDVLKKIFIVALWCIQLKPVDRPSMNKVVEMLEGDIENIEMPPKPLLYPHETNQDNLDSNSNETESDWSTSYVEEIVTNPLLK* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0835 706 SUPERFAMILY Protein kinase-like (PK-like) 368 656 IPR011009 -
Mtr1g0835 706 MobiDBLite consensus disorder prediction 666 693 - -
Mtr1g0835 706 SMART serkin_6 383 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0835 706 ProSiteProfiles Protein kinase domain profile. 383 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0835 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Mtr1g0835 706 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 25 685 - -
Mtr1g0835 706 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Mtr1g0835 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 25 685 IPR045874 GO:0004672
Mtr1g0835 706 Pfam Wall-associated receptor kinase galacturonan-binding 35 97 IPR025287 GO:0030247
Mtr1g0835 706 Pfam Protein kinase domain 387 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0835 706 MobiDBLite consensus disorder prediction 675 693 - -
Mtr1g0835 706 Gene3D Phosphorylase Kinase; domain 1 358 458 - -
Mtr1g0835 706 Gene3D Transferase(Phosphotransferase) domain 1 459 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0835 Mtr-Chr1 9492410 9502188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0835 334 679 Receptor kinase-like Gene Family AT1G66910 46.648 2.71e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0835 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0835 - - cam:101508554 1009.59