Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0834 ATGGTAACCAGGTCAAATATTTTGGTGGTCATGGTTCTAATCTTGGTGTGCAATTGCAACACAGTGATATGCCATGTTAATGGTTGTAGCGGGAGGGATTTCAGATGCGGACCTCATGGTCCGCCAATCCGATTTCCCTTCCGATTTAAAGACAGGGAAGAAAAATATGGTTGCAGTTACCCCGGATTTGAGCTTACTTGTTCAGACACAAGAAAAACTCTAATAGAGCTTCCTACACATTCTGGTCCAATTCAATTAGAAGTGAAGAGGATATTTTATGACGACCAGGAACTATGGATATCTGATCCTGAAAATTGCCTTCCAAAACAGTTGTTAAAGCTTCTTCATTCACAAATTTCACCTTTTCAATTATTTGCAAGATCCGACTCCAATAATAGCTACACTTTCATGGATTGTAGTTCATTAACCTGCCCGGTTTATTTTGCTGATTCTGGTACACGATTCCTTGATTCGGGTTTGGACCCAATACTCTGCACCAAGACTTTAGATATTATTTTTTCATCGTTGTCCTTGCAATATAAGAATATTTTGGTTATGACATGGTCAAAACCCAATTGTAGCAGGTGTGAAGTAGAAGACAAGATGTGTAAACTGAAAAACAATGGAACTGAAGACGAGATAGAATGTTTTGATCGTCATCACAAACCTACTAAGAAGATAATTCTATATGCCACAGTTGTGTTCGTAGGTTCCGTTATGATAACACTGATTATTGCAGCCTGTTTGCATCTCTATAGCTATTTTAAACTGAAAGGTGAAGATGAGACTAGAATCGAAAAGTTCTTAGAGGATTACAGGGCACTCAACCCTGCAAGATTCTCTTATGTTGATATAAAGAGGATTACAAATAATTTTAGGGAAGAGTTAGGTGAAGGAGCTCATGGTGCAGTTTTCAAAGGTAAATTATCTAATGAAATTCTTGTGGCTGTGAAGATGCTTAAAAACACCGAGGGCGATGGAAAAGAGTTCATTAACGAAGTGAAAGCTATGGGAAAAATTCATCACATCAATGTTGTTCGCTTGGTTGGATTTTGCGCCGATGGATCCTACCGTGCTCTTGTTTATAATTTCTTTCCAAATGGTTCGTTACAGAACTTCATAACCCGACCTGATGATATGGACCATTTTCTCGGATGGGAGAAGCTACAACAAATTGCTCTTGGCATAGCCAAAGGTATTGAGTATCTTCACATGAGTTGTGATCAGCAAATTCTTCACTTCGATATTAATCCCTATAACGTGTTATTAGATGACAAGTTTGTTCCAAAAATTACTGATTTTGGTTTGGCGAAATTGTGCTCTAAAAATCAAAGCAAAGTGTCAGTAACTGCTGCAAGAGGGGCTTTAGGTTACATTGCACCTGAAGTGTTTTCGAGGAACTTTGGAAATGTATCGTATAAAGCTGACATATATAGTTATGGGATGTTACTTCTTGAAATGGTTGGAGGAAGAAAAAATATAGGTCAGTTGTCTGAGGAAAATTTCCAAGTTCTATATCCAGAATGGATTCACAATCTACTTGAAGGCCGAGATATTCACGTAAATATTGAAGGAGCAGAAGATGATAGAATTTTAAAGAAACTCGCAATCGTAGGACTATGGTGCATACAGTGGAATCCAATAAATCGTCCATCTATAACAGTTGTGCTCAAAATGTTAGAGGCTCTAGAAGAAGAAAACTTGATTGTTCCCCCAAACCCTTTTAACTCGACGACGTCCAGAGTTGTGGAAACCAAAACAAAATTTTCAACCTTAGAGTTGGAAGCTATACATGAATGA 1800 0.3794 MVTRSNILVVMVLILVCNCNTVICHVNGCSGRDFRCGPHGPPIRFPFRFKDREEKYGCSYPGFELTCSDTRKTLIELPTHSGPIQLEVKRIFYDDQELWISDPENCLPKQLLKLLHSQISPFQLFARSDSNNSYTFMDCSSLTCPVYFADSGTRFLDSGLDPILCTKTLDIIFSSLSLQYKNILVMTWSKPNCSRCEVEDKMCKLKNNGTEDEIECFDRHHKPTKKIILYATVVFVGSVMITLIIAACLHLYSYFKLKGEDETRIEKFLEDYRALNPARFSYVDIKRITNNFREELGEGAHGAVFKGKLSNEILVAVKMLKNTEGDGKEFINEVKAMGKIHHINVVRLVGFCADGSYRALVYNFFPNGSLQNFITRPDDMDHFLGWEKLQQIALGIAKGIEYLHMSCDQQILHFDINPYNVLLDDKFVPKITDFGLAKLCSKNQSKVSVTAARGALGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMVGGRKNIGQLSEENFQVLYPEWIHNLLEGRDIHVNIEGAEDDRILKKLAIVGLWCIQWNPINRPSITVVLKMLEALEEENLIVPPNPFNSTTSRVVETKTKFSTLELEAIHE* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0834 599 ProSiteProfiles Protein kinase domain profile. 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0834 599 Pfam Wall-associated receptor kinase galacturonan-binding 29 102 IPR025287 GO:0030247
Mtr1g0834 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 599 IPR045874 GO:0004672
Mtr1g0834 599 Gene3D Transferase(Phosphotransferase) domain 1 365 571 - -
Mtr1g0834 599 Gene3D Phosphorylase Kinase; domain 1 265 364 - -
Mtr1g0834 599 PANTHER RECEPTOR-LIKE KINASE 18 599 - -
Mtr1g0834 599 Pfam Protein kinase domain 293 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0834 599 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Mtr1g0834 599 SUPERFAMILY Protein kinase-like (PK-like) 272 561 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0834 Mtr-Chr1 9488590 9490923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0834 262 574 Receptor kinase-like Gene Family AT1G66980 48.598 5.43e-94 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0834 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0834 - - aip:107619931 678.322