Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0833 ATGTATTATGCGGATACAGCTTCATGCCTGGATCAACAAACATATGTTATTGTTGGGGATCCACACTTTGGAATATTGCAGCCTCAATGCCGTGTTGAGCTTGTTACTCTCACATCCTCCTGGCGAGATACACTACATGCATACGACATTAAAGGTAACGTTTCGTATATTGATATTCACAAGGCGTTAAGCTATGGATTTGAAATTTCTTCGATGAAAGCCTCTTGTCCTTGTGATCAATGCTTCCTCAACGACACTATTGGCGAGATTCAATGTTACGTTCCCGATTGTCCTTTTGACTCTTGCGGATATTGGTCCTACAAGTCCCGCCTTCTATTTGATTATGTCGCTGGCATTTACGGAGGACTTCGAGAGTTGACAGGCATGGATAAGATAAATCATCAAATATATAAGTCATATATTAACATGTACAAAGCAGGAATAGTTACAGGAAGGTATGTTCTACCATACCTTGCACCTAGAGTTATATTGGGCATCATATTTTTCTCGACACTGTTGATCTATACATATCGGAGAAGACATGCATCGATATATGAAAATATTGAAGATTTTCTGCAAGGTAATACTCTCATGCCAATAAGGTATTCATACAAAGAGATAAAGCAGATGACAAAAAATTTCAAGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAGAGGAAATCTAATAAGTGGGCCATTTGTAGCCATAAAGATGTTGAAAATTAAATCGAAAACCAATGGGCAAGATTTCATAAGTGAAGTTGCAACTATAGGAAGAATATACCATTCAAATGTGGTAAGACTCATCGGGTTTTGTGTCGAAGGATCGAAACGTGCTCTTGTTTACGAGTACATGCCCAATGGCTCACTTGATAAATATATTTTCAACAAAGAGGGAGTTATATCTCTAACTAACGACCAAATATATGAGATATCTCTTGGAGTGGCTCTTGGAATTTCATATCTTCATCAGGGTTGTGATATGCAAATTTTGCATTTTGATATTAAGCCTCACAACATCCTTCTTGACGAAAATTTCATCCCTAAAGTTTCGGACTTTGGTCTTGCAAAGCTTTATCCTATTGACAAAAGCATTGCCACTTTGATGGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAACTGTTCTTCCAAAATATTGGGGGAATATCATATAAGGCTGATGTGTATAGCTTTGGTATGCTTTTGATTGAAATTGCAAGTAGGAGAAGAAATTTGAATTCACATGCTGAGCATTCAAGTCAACTTTATTTCCCCTTTTGGATTTATGATCAATTGGTTAAAAATACGGTTAGAGAAATGGAAGATGTGATTATGGAGGAAATTAATGATGTTTTGAAGAAAATGTTCATAGTTGCACTTTGGTGTATACAGTTGAAACCCATTGATCGTCCTTCAATGAACAAAGTAGTAGAGATGCTTGAAGGGGATATTGAAAGTTTTGAAATTCCTCCAAAACCATTACTATATCCACATGAAACAATTCAAGAGAATCTTGATAGCAACTCAAATGAAACTGAATCAGATTGGTCAATCAGTTATGTGGAGGAAAAAGTGAGCAATCCTTTATTGAAGTAA 1608 0.3669 MYYADTASCLDQQTYVIVGDPHFGILQPQCRVELVTLTSSWRDTLHAYDIKGNVSYIDIHKALSYGFEISSMKASCPCDQCFLNDTIGEIQCYVPDCPFDSCGYWSYKSRLLFDYVAGIYGGLRELTGMDKINHQIYKSYINMYKAGIVTGRYVLPYLAPRVILGIIFFSTLLIYTYRRRHASIYENIEDFLQGNTLMPIRYSYKEIKQMTKNFKVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSKTNGQDFISEVATIGRIYHSNVVRLIGFCVEGSKRALVYEYMPNGSLDKYIFNKEGVISLTNDQIYEISLGVALGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDKSIATLMAARGTIGYMAPELFFQNIGGISYKADVYSFGMLLIEIASRRRNLNSHAEHSSQLYFPFWIYDQLVKNTVREMEDVIMEEINDVLKKMFIVALWCIQLKPIDRPSMNKVVEMLEGDIESFEIPPKPLLYPHETIQENLDSNSNETESDWSISYVEEKVSNPLLK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0833 535 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 30 515 - -
Mtr1g0833 535 Pfam Protein kinase domain 215 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0833 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Mtr1g0833 535 SMART serkin_6 212 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0833 535 SUPERFAMILY Protein kinase-like (PK-like) 197 485 IPR011009 -
Mtr1g0833 535 ProSitePatterns Protein kinases ATP-binding region signature. 218 240 IPR017441 GO:0005524
Mtr1g0833 535 Gene3D Transferase(Phosphotransferase) domain 1 288 492 - -
Mtr1g0833 535 Gene3D Phosphorylase Kinase; domain 1 188 287 - -
Mtr1g0833 535 ProSiteProfiles Protein kinase domain profile. 212 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0833 535 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 515 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0833 Mtr-Chr1 9467838 9486914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0833 145 508 Receptor kinase-like Gene Family AT1G66910 45.479 5.50e-104 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0833 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0833 - - cam:101508554 799.66