Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0832 ATGATGAAGAAACAAGCTTCGTGTTCTAGTTCATCATATGTACAAACACTAGTATTACTATTTGCTTCAATTCTTCTCATTTCTCATCAAAATTGTCTTGCTAAGCATCACCAACCATGCCCAACGTCATCATGCGGCAAAATCACCAACATAACATACCCATTTCGTCTCAAAACTGATCCAAACCACTGTGGGGACAAAAGGTATGAATTAGATTGCAACGAAAATGGTCCATCATTAACCATGTTCTCCGGGAAATACTATGTACAACACATAGATTACAAGAGGTTTATAATTCGATTAAGTGACGCGGGTGCAGTGGAAGATGCTAATTGCTCTTTCATCCCGCGGTACTTTTTATATCCTCAAAGTTTCAGTAATTCCCTTTCCTTCAACAAAGCAGATTTTGTGTTTGAGCCGTACTCGTTGCGTTTTCGGGATCAAACGCAGGTAGCGTATTTCAATTGTTCTAATCCAATTAAAGATCATATGTATGTTAACGTGGACATGAGCTGTTGTAACATACATGGGAATAGTAGTACTAATCATGTATATGCAGTTTTGGAACAATCATCATCATTCTCCAGGTATAGTTTTGGGGATATTAAGGTTGGGTGTGATTTTATGGTGGCTACGTTGGGTAGGCCATTGTTGAAGATTGAAGTGAAAGAGAAGATTTCTTATGATGTGATTCATGGGATGATAATTGATGGATTTGAGCTTTCATGGTTGCCTGTGATTTGTGAAGATAGATGTGGAAAGGAGACAAGTTGTGAGGTTGTTGATGAAGATAGTGGAGAAGTTCAATGTGATAAGCGATTCTGTCATTATGTATACCAAACAACCGAAAAATGTGGACTTCAGGACCAGATATTTGGTTATGCTCGTGGTTATCTTAGAGGCATTTTTATTGGACTTAGAAGTAGAATCACATTTAGCACAAGACAATTGGACAATCCTGTTGGACTAGAATACTTTGATCTAGGAATAGTCATAGGAAGAAATGTTATACCTTTATTCTTAGCAACCAGATTTATATTTGGAGTTATAGCTCTACTTGTGCTGTTTATCTACAAATGGAAAAGAAGACATTTATCGATGTATGACAACATTGAAAACTTTTTGCTAGAGAGCAATCTAAACCCTATTAGGTATGAATACAAAGAAATCAAGAAGATGACTGCAGGTTTAAGAGTGAAATTAGGACAAGGAGGTTTTGGTGCTGTCTACAAAGGAAAGCTAAGAAGTGGACCGGATGTTGCAATTAAGATGTTGACAAAATCCAATGTTAATAATGGACAAGATTTTATTAACGAAGTTGCGACCATTGGAAGAATACATCATGTTAATGTAGTTCGTCTTGTTGGATACTGTGTTGAAGGGAAAAAGAGTGCATTGGTTTACGAGTTCATGCCAAATGGATCGTTGGATAAATACATTTTCCCTAAAGAAGGAATTAACGCTTTGAGTTATGAGAAAACATATGAAATATCTCTCGGAATAGCTCGTGGGATAGAATATCTGCATCAAGGATGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGACGAAGAGTTTGTTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTATATCCTGTGAACGATAGCATTGTTACCTTAACTGCGGCAAGAGGAACTTTGGGTTACATGGCTCCTGAACTGTTCTACAAAAATATTGGTGGAGTGTCTTACAAGGCTGATGTATATAGCTTTGGAATGCTTTTGATGGAAATGGCAGGTAAAAGGAAGAATTCGAATCCTAATGCAGAGCATTCAAGTCAGCATTACTTCCCGTTTTGGATCTACGATCAATTTAAAGAAGAGAGAGATATTGAAATAATGGAAGATGTCTCTGAAGAGGAAATGGCAGTAGCTAAAAAGATGTTCATGGTTGCATTTTGGTGTATTCAGTTGAAACCGAGTGATCGTCCTACAATGAACAAAGTAGTTGAGATGCTTGAAGGGAAAACTGAAAGCCTTGAATTTCCCCCAAGACCTTCTTTTTATCCAAATGAAAATTATAAATATCATGATGAAATCAACTCTGACCGAACATCATGGGGTGCTTCCACTAGTTATTCATCAGATAATTGCTCTTGA 2142 0.3697 MMKKQASCSSSSYVQTLVLLFASILLISHQNCLAKHHQPCPTSSCGKITNITYPFRLKTDPNHCGDKRYELDCNENGPSLTMFSGKYYVQHIDYKRFIIRLSDAGAVEDANCSFIPRYFLYPQSFSNSLSFNKADFVFEPYSLRFRDQTQVAYFNCSNPIKDHMYVNVDMSCCNIHGNSSTNHVYAVLEQSSSFSRYSFGDIKVGCDFMVATLGRPLLKIEVKEKISYDVIHGMIIDGFELSWLPVICEDRCGKETSCEVVDEDSGEVQCDKRFCHYVYQTTEKCGLQDQIFGYARGYLRGIFIGLRSRITFSTRQLDNPVGLEYFDLGIVIGRNVIPLFLATRFIFGVIALLVLFIYKWKRRHLSMYDNIENFLLESNLNPIRYEYKEIKKMTAGLRVKLGQGGFGAVYKGKLRSGPDVAIKMLTKSNVNNGQDFINEVATIGRIHHVNVVRLVGYCVEGKKSALVYEFMPNGSLDKYIFPKEGINALSYEKTYEISLGIARGIEYLHQGCDMQILHFDIKPHNILLDEEFVPKVSDFGLAKLYPVNDSIVTLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNSNPNAEHSSQHYFPFWIYDQFKEERDIEIMEDVSEEEMAVAKKMFMVAFWCIQLKPSDRPTMNKVVEMLEGKTESLEFPPRPSFYPNENYKYHDEINSDRTSWGASTSYSSDNCS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0832 713 CDD STKc_IRAK 401 669 - -
Mtr1g0832 713 SMART serkin_6 395 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0832 713 SUPERFAMILY Protein kinase-like (PK-like) 400 694 IPR011009 -
Mtr1g0832 713 Gene3D Phosphorylase Kinase; domain 1 372 470 - -
Mtr1g0832 713 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Mtr1g0832 713 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 697 IPR045874 GO:0004672
Mtr1g0832 713 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Mtr1g0832 713 Gene3D Transferase(Phosphotransferase) domain 1 471 676 - -
Mtr1g0832 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Mtr1g0832 713 ProSiteProfiles Protein kinase domain profile. 395 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0832 713 Pfam Protein kinase domain 400 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0832 713 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 3 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0832 Mtr-Chr1 9452422 9455628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0832 41 683 Receptor kinase-like Gene Family AT5G38260 33.896 3.49e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0832 Pkinase 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0832 - - lja:Lj0g3v0275229.4 957.207