Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0831 ATGGCCAATTTTCACAATTTCGCCTTTCTACTAACTATGTTCTTTCTTCTATTAACAGAACCAGTAACATCCAAAAATCCATGCACTGAAAAATGTGGAAAAGTTCGAATTCAATTTCCATTTCATCTCAAAAACAACACCACGAATCACACAAATCCTCAAGGTTTTGAATTATCATGTACAGACAAAGGTGAAACCATGTTAGAAATTCCCACAATTCAATTAAAACTTTTCATCAAACGCATAGATTACAAAGCTCAAAAGTTCCAAATCTATGACCCGAAAAACTGTCTTGCAAGACAATTATTAAAACTAGGAAACTTATCAGTTTCACCGTTTCAGTTTCAATTGCCGGAGTTTGATACACGGCGTAACATTAACATTTCTTTCTTTCATTGTGATTCGAACAAGGAGTGTCCGATTCTGCTACGTGATTCCAGTCATGATTTTATTGATCCTAAATTGGTTTCATGTAGAAAAGTGAGTGAAGTTTTGAATGTGGGCTGGATGATTGAGGAATGGGAAGATGATGTTGCAGAGAGTTTGATTATGAAATGGTCTAAACCAAATTGTAGTTTTTGTGAAGTTCAAGGGAAGAAATGTAAATGGAAGAATGGTACTAGAAATGGTGAAGTTGAATGTTTTGTTTGTAAATCAGATGGGATTGCAAGATCTACTGTTCTTCTAATTACTACTGGGGTTATAGTTGGTTCCATGATTTTGCTGCTATTGGCAAATGGATTTCTTCGCATTTATCGTTATTTTAAGATGAAAGGAGATGACATAACAAGGATAGAAAACTTCTTGGAGGATTATAGAGCAATGAAACCAACAAGATTTACTTATGCTGATATTAAAAGAATAACAAATGGTTTTAAGGAAAATTTAGGAGAAGGAGCTCATGGAGCCGTATTCAAAGGCATGCTATCCCAAGAAATTTTGGTTGCTGTGAAGGTGCTCAATGAGACACAAGGAGATGGAAACGATTTCATCAATGAAGTCCGAACTATGGGAAAAATTCATCATTTCAATGTTGTTCGCTTGCTCGGATTCTGTGCTGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTTCCAAATGGGTCGTTGCAAAAATTCTTGGCGCCACCGGAGAACAATGATGTTTTTCTTGGTTGGGAAAAGTTGCAACGCATTGCTCTTGGTGTTGCTAGAGGGATTGAGTATCTTCATATTGGTTGTGATCATAGAATACTTCACTTTGATATCAATCCACACAATGTGTTAATAGATGATAATTTGAGTCCTAAAATTACTGACTTTGGACTTGCTAAACTGTGTCCCAAAAATCAAAGTACGGTGTCTATAACCGCAGCTAGAGGAACATTGGGCTACATTGCACCTGAAGTTTTCTCAAGAAACTTCGGAAATGTTTCTTACAAGTCTGATATTTATAGCTACGGAATATTGTTGCTAGAGATGGTTGGAGGTAGAAAGAATACTAATGTGTTGGGGGAGGAAACATTCCAAGTTTTGTACCCAGAGTGGATCCATAATCTTATTGAAGATAAAGATGTTCGAGTTAATATTGAGGATGAGGGAGATGTTAGAATCGCAAAGAAACTTGCGCTGGTCGGACTTTGGTGTATTCAATGGAATCCGGTGGATCGGCCATCCATGAAAACCGTGGTACAAATGCTTGAAGGTGATGGAGTAAATTTAATGGCACCCCCTACTCCTTTTGACTCTATTGGTGCTAATAGAACAAATCAAGTCATTCCACCTAGACATCTAAATTTTGAGTTAGAAGTTATTCCTGAAATAGACTAA 1809 0.3693 MANFHNFAFLLTMFFLLLTEPVTSKNPCTEKCGKVRIQFPFHLKNNTTNHTNPQGFELSCTDKGETMLEIPTIQLKLFIKRIDYKAQKFQIYDPKNCLARQLLKLGNLSVSPFQFQLPEFDTRRNINISFFHCDSNKECPILLRDSSHDFIDPKLVSCRKVSEVLNVGWMIEEWEDDVAESLIMKWSKPNCSFCEVQGKKCKWKNGTRNGEVECFVCKSDGIARSTVLLITTGVIVGSMILLLLANGFLRIYRYFKMKGDDITRIENFLEDYRAMKPTRFTYADIKRITNGFKENLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGNDFINEVRTMGKIHHFNVVRLLGFCADGFHRALVYDFFPNGSLQKFLAPPENNDVFLGWEKLQRIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSITAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGILLLEMVGGRKNTNVLGEETFQVLYPEWIHNLIEDKDVRVNIEDEGDVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGDGVNLMAPPTPFDSIGANRTNQVIPPRHLNFELEVIPEID* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0831 602 PANTHER RUST RESISTANCE KINASE LR10-RELATED 42 602 IPR045874 GO:0004672
Mtr1g0831 602 Gene3D Phosphorylase Kinase; domain 1 265 364 - -
Mtr1g0831 602 Gene3D Transferase(Phosphotransferase) domain 1 365 566 - -
Mtr1g0831 602 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 42 602 - -
Mtr1g0831 602 Pfam Protein kinase domain 293 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0831 602 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Mtr1g0831 602 Pfam Wall-associated receptor kinase galacturonan-binding 28 93 IPR025287 GO:0030247
Mtr1g0831 602 ProSiteProfiles Protein kinase domain profile. 290 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0831 602 SUPERFAMILY Protein kinase-like (PK-like) 271 561 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0831 Mtr-Chr1 9444014 9447333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0831 187 573 Receptor kinase-like Gene Family AT1G66910 44.361 1.10e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0831 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0831 - - gmx:100819302 864.759