Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0826 ATGTCACTGATATTAACAAAACTTGCTATGCTGCTATTTCTAATGAACCTTGGAAATTGTCTCAGTGATTCATCCAATCGATGTCCCTTCAAGCTCGAATGTACACATAACAAAAAGATTCTTGAACTTCCTACTCAACCAGTCCCTGTGAAACTCATCCTCACTGACATTGATTATACAGACCCAAGAATAGATTTATCTGATCCTGGAAATTGTTTACCACAACTCTTACTTGACCACAACTTTTCATCAATTTTTCCTTTTAAGCCTTATCTCTCCGGATATTCTGTATCTAGAAATATCAGTTTCTTCAATTGTTCTTCAGTTGTACAACTCAGAAGCTACAATCAAGTGTACGAAGCACAAAATATGACATCATGTCCAATTTATGTTGCTTATTCGGATAGCGATAGTATCATTGAATCTGATCTTGTATACTGCATCAAACTGTTTGATCGCGTTGCTTTATTTCCCGCATCTTCCATTCAATCAAACATACTCTCATTGAAATGGTATGGAACAAATTTTGACTTAGGATGCTTGAAATGTGAACACAAAGCAATGAAAAGGATTGCATTCATTATTTTATCCTCTGCAGGTGTAATAATCGGTTTAACTTTGCTAGTGCTTATGCTCGGTGCTATTATTCGAATTCATCGCCATTTCAAGATGAAAGGCGAAGATCATGAAAGAATCGAAAACTTTTTGAAGGATTATAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATTACAAACAAATTTAAGGATAAGATCGGAGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCAAGTCAAATTCAAGTTGCTGTTAAGATGCTCAATAACGCTGAAGGAGATGGGAAGGAGTTCATAAATGAAGTGGGAACAATGGGCAAAATCCACCATCTCAATGTTGTCCGTTTGCTTGGCTTTTGTGCCGATGGATTTCATCGTGCTCTAGTCTATGACTTCTTCCCAAGTGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGCAACAAAGATAGTTTCCTTGGATGGGATAAGTTGCAACAAATTGCTCTAGGCATAGCCAATGGAATAGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTCTTGATCGATGACAATTTAACCCCAAAAATTACAGACTTCGGTTTGGCTAAGATGTGCTCGAAAAATCAAAGTACTATATCTATGACCGCGGCCAAAGGAACATTAGGATACATGGCACCCGAAGTTTTTTCTAGAAACTTTGGGAATGTCTCTTATAAGTCCGATATATATAGTTATGGCATGTTGTTGCTGGAGATGGTTGGGGGAAGGAAGAATTCGAACACAACCACAAGTGAAGGAAGTCCACAAGTTTTATATCCAGATTGGATCCACAGTTTAGTTGAAGGAGGAGACATACAAATCCCTATAGATGAAGAACAGGATGATTTCAGAATTGCAAAAAAAATGGCAATTGTGGGATTATGGTGCATTCAGTGGCAACCTATGCATCGTCCGTCCATGAAAACTGTGTTGCAAATGTTACAAGGAGAGGGAGACAAGCTAAAAGTTCCACGCAATCCTTTTGGGCCATCGACTTCCACCAATACAACTGCTAGTATCGTTTCAAAACCTATGAGTTTGGAGCTGGAAGTGATTAAAGAGTTAGATTAG 1716 0.3811 MSLILTKLAMLLFLMNLGNCLSDSSNRCPFKLECTHNKKILELPTQPVPVKLILTDIDYTDPRIDLSDPGNCLPQLLLDHNFSSIFPFKPYLSGYSVSRNISFFNCSSVVQLRSYNQVYEAQNMTSCPIYVAYSDSDSIIESDLVYCIKLFDRVALFPASSIQSNILSLKWYGTNFDLGCLKCEHKAMKRIAFIILSSAGVIIGLTLLVLMLGAIIRIHRHFKMKGEDHERIENFLKDYKALKPTRFSYADIKRITNKFKDKIGEGAHGAVYKGKLSSQIQVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPSGSLQKFISPPSNKDSFLGWDKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNLTPKITDFGLAKMCSKNQSTISMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNSNTTTSEGSPQVLYPDWIHSLVEGGDIQIPIDEEQDDFRIAKKMAIVGLWCIQWQPMHRPSMKTVLQMLQGEGDKLKVPRNPFGPSTSTNTTASIVSKPMSLELEVIKELD* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0826 571 Pfam Protein kinase domain 260 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0826 571 ProSiteProfiles Protein kinase domain profile. 257 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0826 571 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Mtr1g0826 571 Gene3D Phosphorylase Kinase; domain 1 231 331 - -
Mtr1g0826 571 SUPERFAMILY Protein kinase-like (PK-like) 240 529 IPR011009 -
Mtr1g0826 571 Gene3D Transferase(Phosphotransferase) domain 1 332 539 - -
Mtr1g0826 571 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 570 IPR045874 GO:0004672
Mtr1g0826 571 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0826 Mtr-Chr1 9369551 9371777 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0826 195 566 Receptor kinase-like Gene Family AT1G66910 45.052 2.63e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0826 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0826 - - adu:110273083 645.58