Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0825 ATGAGCAGAGGGAAATCCTTCTCCTGTTATGCGGAATCAATATCACTTTTAAGCTTCCTCCAAATTGTGACGGTGGTTGCTGTGCTACTATTTCATCATTGTCAAACTTGTGATGCCATTACTAATTCAAATAACCAAATATGTCCACCTTCTTCATGTGGAAAAATCAGCAACATCAAACATCCGTTTCGACTTATGAATGACCCAACAAGCTGTGGTGATCCGAAGTATGAGTTATCCTGCGAAAACAACATCACAGTGTTAACTCTGTTTTCGGGTAAGTACTATGTGAAGGCAATCAACTACAACAACTACACAATTTTGTTAGTTGATCCCGGAATTGAAGAGGGTAGTTGCTCCTCCCTTCCTCGCTATTTTTTATCCTCATCCAATCTCACATACGACTTGGGTTATGGTTACAATCAGGCCAATGAAGTGGATCCATATCAAATCTTTTTTGATTACTTGCACATAATATACTTGAAATGTAGCAAAGCAGTGAATGATGATCCTGAGTATGTGGATACAGCTCCCTGTATCAACTCCGACTCCAAAAGCTATCTTTATGCTTTTGCGTCAGACTTCTCCTCGAGTGACCACTACTTCTCCGTCGGGAGATTAAAAGACTATTGCCAAGTGAAGCTTGTTGCTATGTCATCTTCAGATTTTCCTAGTGACAGTGCCAAGGTCAGAGAAGGTGTACCAGATCGACATCAACATCGACCACTTTCATACGAGGAAATTCATGGAATGCTACTCTATGGTTTTCAGCTATCGTGGTTGAGCAGAGCTTGTAGAGAATCTTGTGTTGGTTACAGGGGATGCGGCTTGAATGACACCGGTGATCTTGAATGTTCTCAATCAATTGAATCTTGCACTTTACCATTGGGAACGTTAGTCAGCAAAACATGCGACCAAGTGCCAAAGCAGTTCATATTAATGGAAGATATAATACTTGGCATCGTCAAAGGAGTGCTAAATATATTTGGCTTGACAAAAAGCTCTGCTATATTATCACAGAAAAATTTAGAATCTAAAACTGCCATCGATACAGGAAGAGTGATAGGAAGATATCTTTTCCCAATATTTGTTGCAAGATTTGTCCTGGGCCTTCTGGTTTTCTTTGTGCTATTGATATATACTTGTCGGAGAAGACATATATCAATGTATGAAGATATTGAAGTTTTTCTTCAAGGGAGTACTCTGATTCCAATTAGGTATTCTTACAAAGAAATAAAGAAGATGACTCGAAATTTTAGAGACAAGTTGGGTGAAGGAGGCTTTGGAGCCGTTTTTAAAGGAAAGCTACGCAGTGGGCCATTTGTTGCCATAAAGATGTTGGTTAAATCTAAGGGTAATGGACATGATTTCATTAGTGAAGTCGCAACCATAGGAAGAATACATCACACCAATGTGGCTCGACTTATTGGGTTTTGTGTTGAGGGATCAAAGCGTGCTCTTGTTTATGAATTCATGTCCAATGGTTCTCTTGATAAATATATTTCCTCTAGAGAGGATACTATCTCTCTAAGTTATCAGAAAATGTACGAGATATCTCTTGGAGTGGCTCATGGTATTGCTTATTTACATCAAGGATGCGAAATGCAAATTTTGCATTTTGACATCAAGCCCCATAACATCCTTCTCGATGAGAACTTTAACCCCAAAGTTTCAGACTTTGGTCTTGCACAGCTTTATCCAAATGAGATTAGTATTGTCACTTTAACCGCAGCAAGGGGGACAATTGGATACATGGCTCCTGAATTGTTCTACCAAAATATTGGAGGAGTATCGTACAAGGCCGATGTATATAGCTTTGGAATGCTTTTGATTGAAATGGCAAGTAAGAAAAGAAATTTAAATCCACATGCCGATCGTTCAAGTCAAATTTTCTTTCCCATTTGGATTTATGATCAATTGATTGAAGAAAAGGAGATAGAAATGGATGAAATTACATATGAGGAAAATAATAATGTGAAGAAGATGTTCATAATAGCATTATGGTGTATACAATTGAAACCATGTGATCGTCCCTCAATGAATAAAGTGATAGAGATGCTTGAAGGAGATATTGAGAATGTTGAAATGCCTCCAAAGCCTTTACTGTATCCAAATGAAATGATTCATGGAGATATTGAAGTCAACTCTCATGAAACTGATGCTGGCTCTCCTAGTTTTATTGATGAAGATACAACAGAGCCTCTACTAATGAATTCTTCTTGA 2223 0.3819 MSRGKSFSCYAESISLLSFLQIVTVVAVLLFHHCQTCDAITNSNNQICPPSSCGKISNIKHPFRLMNDPTSCGDPKYELSCENNITVLTLFSGKYYVKAINYNNYTILLVDPGIEEGSCSSLPRYFLSSSNLTYDLGYGYNQANEVDPYQIFFDYLHIIYLKCSKAVNDDPEYVDTAPCINSDSKSYLYAFASDFSSSDHYFSVGRLKDYCQVKLVAMSSSDFPSDSAKVREGVPDRHQHRPLSYEEIHGMLLYGFQLSWLSRACRESCVGYRGCGLNDTGDLECSQSIESCTLPLGTLVSKTCDQVPKQFILMEDIILGIVKGVLNIFGLTKSSAILSQKNLESKTAIDTGRVIGRYLFPIFVARFVLGLLVFFVLLIYTCRRRHISMYEDIEVFLQGSTLIPIRYSYKEIKKMTRNFRDKLGEGGFGAVFKGKLRSGPFVAIKMLVKSKGNGHDFISEVATIGRIHHTNVARLIGFCVEGSKRALVYEFMSNGSLDKYISSREDTISLSYQKMYEISLGVAHGIAYLHQGCEMQILHFDIKPHNILLDENFNPKVSDFGLAQLYPNEISIVTLTAARGTIGYMAPELFYQNIGGVSYKADVYSFGMLLIEMASKKRNLNPHADRSSQIFFPIWIYDQLIEEKEIEMDEITYEENNNVKKMFIIALWCIQLKPCDRPSMNKVIEMLEGDIENVEMPPKPLLYPNEMIHGDIEVNSHETDAGSPSFIDEDTTEPLLMNSS* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0825 740 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 713 IPR045874 GO:0004672
Mtr1g0825 740 SMART serkin_6 417 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0825 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Mtr1g0825 740 SUPERFAMILY Protein kinase-like (PK-like) 402 688 IPR011009 -
Mtr1g0825 740 ProSitePatterns Protein kinases ATP-binding region signature. 423 445 IPR017441 GO:0005524
Mtr1g0825 740 ProSiteProfiles Protein kinase domain profile. 417 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0825 740 Pfam Protein kinase domain 420 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0825 740 Gene3D Transferase(Phosphotransferase) domain 1 492 696 - -
Mtr1g0825 740 Gene3D Phosphorylase Kinase; domain 1 398 491 - -
Mtr1g0825 740 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 18 713 - -
Mtr1g0825 740 MobiDBLite consensus disorder prediction 718 740 - -
Mtr1g0825 740 Pfam Wall-associated receptor kinase galacturonan-binding 48 111 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0825 Mtr-Chr1 9318919 9329726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0825 406 739 Receptor kinase-like Gene Family AT5G38280 47.507 2.33e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0825 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0825 - - mtr:MTR_1g027830 849.736