Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0824 ATGAAAAGTGAAGATCATACAAGAATTGAAAACTTTTTGAAGGATTACAGGGCTTTAAAGCCAACTAGGTTCTCTTATGCAGACATAAAGAGAATTACAAATAAATTTGAAGATAAGATAGGCGAAGGGACTCATGGAGCTGTTTATAAAGGTAAATTATCGAACCAAATTCTAGTAGCCGTGAAGATTCTTAATAATGCAGAGGAAGATGGGAAGGAATTCATAAATGAAGTGGGAACCATGGGCAAGATTCATCATCTAAATGTCGTTCGTTTGCTTGGCTACTGCGCGGATGGATTTCGCCGTGCTTTAGTCTATGACTTTTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTTCCCCAAACAACAAAGATGATTTCCTTGGATGGGATAAGTTGCAAAAAATTGCTCTAGGTATAGCCAATGGCATTGAGTATCTCCACCAAGATTTTGGTTTGGCCAAGATGTGTTCGAAAAATCAAAGTATTGTATCCATGACTGCGGCTAAGGGAACAGTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAATTTTGGAAATGTCTCTTATAAGTCCGATGTATACAGTTACGGTATGTTATTGTTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAACAGGTGGTGAAGAAAATATACAAATTGAGTATCCAGACTGGATCCACAATTTGCTTGAAGGAGGAGATATACAAATCCCTATTGATGAAGAGGGAGATTTTAGAATTCCAAAAAAATTGGCAACTGTGGGACTATGGTGTATCCAATGGCACCCTTTGCATCGTCCGGCAATGAAATTTGTGATACAAATACTTCAAGGAGAGGGGGACATGTTAAAAGTACCAACTAATCCTTTCGGGCCAACAACTACAACTTATACAAATGCTAATATTGTTCCAGAACGCATGAATTTAGAGCTGGAGGTGATTGAAGAACTAGAATAG 963 0.3811 MKSEDHTRIENFLKDYRALKPTRFSYADIKRITNKFEDKIGEGTHGAVYKGKLSNQILVAVKILNNAEEDGKEFINEVGTMGKIHHLNVVRLLGYCADGFRRALVYDFFPNGSLQKFISSPNNKDDFLGWDKLQKIALGIANGIEYLHQDFGLAKMCSKNQSIVSMTAAKGTVGYMAPEVFSRNFGNVSYKSDVYSYGMLLLEMVGGRKNTKTTGGEENIQIEYPDWIHNLLEGGDIQIPIDEEGDFRIPKKLATVGLWCIQWHPLHRPAMKFVIQILQGEGDMLKVPTNPFGPTTTTYTNANIVPERMNLELEVIEELE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0824 320 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 149 - -
Mtr1g0824 320 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 150 320 - -
Mtr1g0824 320 Gene3D Transferase(Phosphotransferase) domain 1 150 291 - -
Mtr1g0824 320 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
Mtr1g0824 320 Gene3D Transferase(Phosphotransferase) domain 1 109 149 - -
Mtr1g0824 320 ProSiteProfiles Protein kinase domain profile. 34 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0824 320 Pfam Protein tyrosine and serine/threonine kinase 35 149 IPR001245 GO:0004672|GO:0006468
Mtr1g0824 320 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 149 IPR045874 GO:0004672
Mtr1g0824 320 PANTHER RUST RESISTANCE KINASE LR10-RELATED 150 320 IPR045874 GO:0004672
Mtr1g0824 320 Pfam Protein kinase domain 150 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0824 320 SUPERFAMILY Protein kinase-like (PK-like) 15 278 IPR011009 -
Mtr1g0824 320 Gene3D Phosphorylase Kinase; domain 1 9 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0824 Mtr-Chr1 9316013 9318026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0824 1 291 Receptor kinase-like Gene Family AT1G66910 42.593 2.28e-82 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0824 Pkinase 3.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0824 - - lja:Lj0g3v0145559.1 467.233