Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0823 ATGGCAAATTTTCACAATTTTCCCTTTATAGTAGTAACTCTATTATTTCTCCTGTTAACAAAACCAGTAACATCCAAAAATCAATGCACTGAAAAATGTGGAAACCTTAAAATTCAGTTTCCATTTTATCTCAAAAACAGCATTAATCACACCAATCCTCAAGGATTTGAATTATCATGTACAGATAAAGATGAAACAGTGTTAGAATTTCCCAAAATTCCTGTCAAAGTTTTCATCAAACGCATAGATTACAAATCTCAGATGTTCCAAATCTACGACCCGAAAAATTGTCTTGCAAGACAATTATTTAAACTAGGAAACTTATCAGTTTCGCCGTTTCAGTTTCACTTCCATGAGTTTAATATACAGCGTAACGTATCTTTCTTTCGTTGTGATTCGAACAAAGAGTGTTCGATTCAGCAACGTGAATCTAGTGGTGATTTTATTGATCCTGAATTGGTTTCATGTAGAAAAGTGAGTGAAGTTTTGAATGTGGGCTGGATGATTGAGGAATGGGAAGATGATGTTACAGAGAGTTTGATTATAGAATGGTCTAAACCAAATTGTAGTTTTTGTGAAGTTCAAGGGAAGAAATGTAAATGGAAGAATGGTACTAGAAATGGTGAAGTTGAATGTTTTGTTTGTAAATCAGACGGGATTGCAAAATCTACTGTTCTTCTAATTACTGCTGGGGTTATAGTTGGTTCCATGATTTTGCTGCTATTGGCAAATGTATTTCTTCGCATTTGTCGTTATTTTAAGATGAAAGGAGATGATATAGCAAGGATAGAGAAATTCTTAGAGGATTACAGGGCATTGAAACCTACAAGATTCACTTATGCTGATATTAAGAGAATAACAAATGGCTTCAAAGAGAGTTTAGGAGAAGGAGCTCATGGATCCGTGTTCAAAGGCATGCTCTCCCAAGAAATTTTGGTTGCTGTGAAGGTTCTCAATGAAACACAAGGAGATGGAAACGATTTCATCAACGAAGTCGGAACTATGGGAAAAATTCATCATGTCAATGTTGTTCGCTTACTCGGATTTTGTGCTGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTTCCGAATGGCTCCTTGCAGAACTTCTTAGCACCACCAGAGAACAAGGAAGTTTTTCTCGGTAGGGAAAAGTTGCAACGAATTGCTCTTGGTGTTGCAAGAGGGATTGAGTATCTTCATATTGGTTGTGATCATAGAATACTTCACTTTGATATCAATCCACACAATGTGTTAATAGATGATAATTTGAGTCCCAAAATAACCGACTTTGGACTTGCTAAATTGTGTCCGAAAAACCAAAGCACAGTGTCTATGACTGCAGCGAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCGAGAAACTTCGGAAATGTTTCTTATAAGTCTGATATTTATAGCTACGGTATGTTGTTGCTTGAGATGGTTGGTGGAAGAAAGAATACTAACCAGTCAGCCAAGGAAACATTCCAAGTTTTGTACCCAGAATGGATTCACAATTTGATTGAAGGTAAAGAAGTACGGGTTAATATTGAGGATGAGGGAGATGTTAGAATTGCAAAGAAACTTGCGCTGGTCGGACTTTGGTGTATTCAGTGGAATCCGGTGGATCGGCCATCCATGAAAACCGTGGTACAAATGCTTGAAGGTGATGGAGAAAAATTAATGGCGCCCCCTACTCCTTTCGACTCCATTGGTGCTGATAGAACAAATGAAGTTATTCCAACTAGACTTCTAAATTTTGAGTTGGAAGTTATTCCTGAAATAAACTAA 1803 0.3727 MANFHNFPFIVVTLLFLLLTKPVTSKNQCTEKCGNLKIQFPFYLKNSINHTNPQGFELSCTDKDETVLEFPKIPVKVFIKRIDYKSQMFQIYDPKNCLARQLFKLGNLSVSPFQFHFHEFNIQRNVSFFRCDSNKECSIQQRESSGDFIDPELVSCRKVSEVLNVGWMIEEWEDDVTESLIIEWSKPNCSFCEVQGKKCKWKNGTRNGEVECFVCKSDGIAKSTVLLITAGVIVGSMILLLLANVFLRICRYFKMKGDDIARIEKFLEDYRALKPTRFTYADIKRITNGFKESLGEGAHGSVFKGMLSQEILVAVKVLNETQGDGNDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPPENKEVFLGREKLQRIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNQSAKETFQVLYPEWIHNLIEGKEVRVNIEDEGDVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGDGEKLMAPPTPFDSIGADRTNEVIPTRLLNFELEVIPEIN* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0823 600 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Mtr1g0823 600 ProSiteProfiles Protein kinase domain profile. 288 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0823 600 Gene3D Phosphorylase Kinase; domain 1 263 362 - -
Mtr1g0823 600 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Mtr1g0823 600 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 46 600 - -
Mtr1g0823 600 SUPERFAMILY Protein kinase-like (PK-like) 271 559 IPR011009 -
Mtr1g0823 600 Pfam Protein kinase domain 291 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0823 600 Gene3D Transferase(Phosphotransferase) domain 1 363 566 - -
Mtr1g0823 600 PANTHER RUST RESISTANCE KINASE LR10-RELATED 46 600 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0823 Mtr-Chr1 9309809 9312069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0823 185 571 Receptor kinase-like Gene Family AT1G66910 44.862 6.71e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0823 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0823 - - gmx:100819302 871.692