Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0822 ATGATGAAAAGACAAGCTCAATTTTCTTGTTCATCATTTGTACAACTACAAACATTGGTAAAAATATTTGCTTCAATTTTTATCCTATTCCATCAAAATTGTCTAGCTAAGCATCACCAACCATGTCCAACTTCATCTTGCGGCAAAATTCGCAACATAACATATCCATTTCGTCTCAAAACCGATCCAAATCACTGCGGAGACACAAGGTACGAATTAGATTGCAACAAAAACGGTCCATCATTAACCATGTTCTCCGGGAAATACTATGTACAACACATTGATTACAAGGGATTTAAAATTCGATTAAGTGACGCGGGTGCAGTGGAAGATGCTAATTGCTCTTTTATCCCACGGTACTTTTTATATGATCAAAGTTTTAATAATGTTCTTTTTGGAGAAGACAATTTTGGATCTGAACCGTTCATTCTGGATCCAATAAATCCATTGAGAATAGCGTATTTCAATTGTTCAAGTCCAATAAAAGATCCACGGTACGTTAAGGTGGACACGAGTCGTTGTAGCAGACATGGGAATAGTAGTACTAATCATGTGTATTCTGTTTTGGAACCATCATTGTTTGAGTATCGTGTTGAGGATATTAAGGTTGGGTGTGATTTTATGGTGGCTACATTGGGTAAGGCACAATCAGAGACTGTGAAAGAGAATGTTACTTATGATGAGATTCATGGGATGATAGTTGATGGAGTTGAGGTTTCATGGTTGCCTGTAATCTGTGAAGATAGATGTGGAAAGGGAACAAGTTGTAAGGTTGTTGATGAAGAAAAAGGAGAAGTTCAATGTAATAAGCAGTTATGTCATTATGCTTACCAAACAACTGATAAGTGCGAACTTCAAGACCAGATATTTGGTTATACTCGTGCTTATCTTAGAGGCATTTTTGTTGGACTTGGAAGTAGAATCACATTTAGCACAAGACAATTGGACAATCCTGTTGGACTAGAATATTTTGATGGAGGAATAATTATAGGAAGAAATGTTATACCATTATTCATAGGAATCAGATTTCTCTTTGGAGTTATTGTTCTACTTGTGCTATTTATCTATAAATGGAGAAGGAGACATTTATCTATGTATGATAACATTGAAAACTTTTTGCTAGAAAGCAATCTAAATCCTATTAGGTATGAATATAAAGAAATCAAGAAAATGACCGGAGGTTTTAGAGTGAAGTTAGGTCAAGGAGGTTTTGGTGCTGTATACAAAGGAAAGCTAAGAAGTGGGCCCGATGTTGCGATAAAGATGTTGACAAAATCAAATGTTAATAATGGACAAGATTTTATCAACGAAGTTGCGACCATTGGAAGAATACATCATGTTAATGTGGTACGTCTTGTTGGATACTGTGTTGAAGGAAAAAAGAGTGCACTTGTTTACGAATTCATGCCAAATGGGTCATTGGATAAGTACATTTTCCCTAAAGAAGGAGTTGATCCTTTGAGTTATGAGAAAATATATGAAATATGTCTCGGAATAGCTCGTGGGATAGAGTATCTGCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGACGAAGATTTCGTTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTTTACCCTGTGAACGATAGCATTGTTCCGTTAACTGCGGCAAGAGGAACTTTGGGTTACATGGCTCCTGAATTGTTCTACAAAAATATTGGTGGAGTGTCGTACAAAGCTGATGTATACAGTTTTGGAATGCTTTTGATGGAAATGGCAGGTAAGAGAAAGAACTCGGACCCTAACGCAGCGCATTCGAGTCAACATTACTTCCCATTTTGGATTTATGATCAATTTAAAGAAGAGCGAGAGATTGAAATAATGGAAGATGTCTCCGAAGAGGGAATGACCGTAGCCAAAAGGATGTTTATGGTTGCACTTTGGTGTATTCAGTTGAAACCGAGTGATCGTCCTTCAATGAACAAAGTAGTTGAGATGCTTGAAGGGAAAACTGAAAGCCTTGAATTGCCTCCAAGGCCTTCTTTTTATGCAAATGAAAATTATAAACATCATGATGAAATTAGCTCTGATCATACATCATGGGGTGATTCCACCAGCATTGGCCAAAGTTCAACTAATTATTCATTGGATGATTGA 2151 0.3673 MMKRQAQFSCSSFVQLQTLVKIFASIFILFHQNCLAKHHQPCPTSSCGKIRNITYPFRLKTDPNHCGDTRYELDCNKNGPSLTMFSGKYYVQHIDYKGFKIRLSDAGAVEDANCSFIPRYFLYDQSFNNVLFGEDNFGSEPFILDPINPLRIAYFNCSSPIKDPRYVKVDTSRCSRHGNSSTNHVYSVLEPSLFEYRVEDIKVGCDFMVATLGKAQSETVKENVTYDEIHGMIVDGVEVSWLPVICEDRCGKGTSCKVVDEEKGEVQCNKQLCHYAYQTTDKCELQDQIFGYTRAYLRGIFVGLGSRITFSTRQLDNPVGLEYFDGGIIIGRNVIPLFIGIRFLFGVIVLLVLFIYKWRRRHLSMYDNIENFLLESNLNPIRYEYKEIKKMTGGFRVKLGQGGFGAVYKGKLRSGPDVAIKMLTKSNVNNGQDFINEVATIGRIHHVNVVRLVGYCVEGKKSALVYEFMPNGSLDKYIFPKEGVDPLSYEKIYEICLGIARGIEYLHQGCDMQILHFDIKPHNILLDEDFVPKVSDFGLAKLYPVNDSIVPLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNSDPNAAHSSQHYFPFWIYDQFKEEREIEIMEDVSEEGMTVAKRMFMVALWCIQLKPSDRPSMNKVVEMLEGKTESLELPPRPSFYANENYKHHDEISSDHTSWGDSTSIGQSSTNYSLDD* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0822 716 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Mtr1g0822 716 MobiDBLite consensus disorder prediction 691 716 - -
Mtr1g0822 716 SMART serkin_6 393 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0822 716 Pfam Protein kinase domain 398 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0822 716 Gene3D Transferase(Phosphotransferase) domain 1 469 675 - -
Mtr1g0822 716 ProSiteProfiles Protein kinase domain profile. 393 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0822 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 697 IPR045874 GO:0004672
Mtr1g0822 716 Pfam Wall-associated receptor kinase galacturonan-binding 42 105 IPR025287 GO:0030247
Mtr1g0822 716 MobiDBLite consensus disorder prediction 697 716 - -
Mtr1g0822 716 CDD STKc_IRAK 399 667 - -
Mtr1g0822 716 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 697 - -
Mtr1g0822 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Mtr1g0822 716 Gene3D Phosphorylase Kinase; domain 1 370 468 - -
Mtr1g0822 716 SUPERFAMILY Protein kinase-like (PK-like) 383 691 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0822 Mtr-Chr1 9305878 9309061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0822 43 681 Receptor kinase-like Gene Family AT5G38260 35.077 4.18e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0822 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0822 - - lja:Lj0g3v0275229.4 1013.83