Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0820 ATGAAACTGAACAGAAACCTCACGCAATTATGCACAATTTTAGTAGTTACAATATCCATGGTAACAATAGTATTTGCATCCAATGAATCCCTTTCTTCATCCTTACCCGGTTGCAAAAACACATGTGGAAATGTCAAAATTCCATTTCCATTTGGAATATCAGATTCATCAATACCAAATCAAGGTCCCTGTTACCTAGAGCACAAATTTGAACTCATATGTGAAAATGACACAAAATTACTTTGGGGCAATGTACAAGTGCATAACATAAACATCCTCCAAGGAGAACTTGAAGTGTCATTTTTTGTCTCCGGTTATTGTGGTGGGGAAAATTCCAATGTACCCACTTTAGACACTGCCGTTTTCAGGATATCAAGCACTGAAAACAAGTTCATAACGGTTGGTTGTGACAGTTACGGTTATCTCAACAGTATTTACAACGAAGAAACATATTCAACCGGTTGCTTAACAAGATGTTATGGTAATCGGAATCAAATTGAAAACGGAACATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACATATGATGAGGAATATAAGTGTACAAGTTTCTGATTTTCCTAATTCCACGGATTCTTTGGGGTGTAGTTATTCATTTGTTGTTAAAGATGGATCCTATAATTTTACTGTTTCTCATTTGGATAATTTTCCTTATAAGATGCTTCCATTGATTCTTGATTGGAGTGTGGGAAAAACTTGTAAGGAAGATGAATATGCTTGCAAGAAGAATAGTGATTGCATTGATGTGGACATTGATTTTGGTTACCAATGTAAATGCAAGGAAGGTTATGAAGGAAACCCGTATCATCCAGATGGCTGCATAGACATCGACGAATGTAAGACATTGAATAACACATGCATAAGTGAAAGTCATTGTCGCAACACGGATGGGTTTTACGAATGTTTTTGTCCTAATGGACAATCTGGAAATGGAACATTGGAAGGAGGTTGTCATAGACGAGATATTGTTACCAAGGTTGCCATTGGATCAAGTGCTGGACTAATAGTCCTATTTGTGGCGGTTTCATCTCTATACTTGACGTACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGTGGTTCTATTTTGCTACAACAACTATCAACAAGAGAAGACACTTCGCAATCAGCTCAAATATTCACGGAAGAGGAACTTAAGAAAGCCACCAAAAACTACGACGAAAGCTTAATCATCGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAATTTTGCCCGATAACAAAATTGTCGCTGTCAAAAAGTCCAAAATAATAGACGCAAATCAGATCGAGCAATTCATTAATGAGGTAGTTGTTCTGTCCCAAATAAATCATAGGAACGTTGTCAAACTTTTAGGGTGTTGTTTGGAGACAGAAGTTCCTTCGTTGGTGTATGAATTTGTTAGCAACGGAACACTTTTTGATTTCATACAAAATTGTAAAGATAAAGCAAACAATCCAGCATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCTGGTGCTTTATCATATCTACATTCAGCTGCATCAATTCCAATTATCCATAGAGATGTTAAGAGTACCAACATTCTCTTGGATGACAATTACACTGCAAAAGTTTCCGACTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACCGAGATAGCGACAATGGTACAAGGAACTCTTGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACCGAAAAAAGTGATGTGTATAGCTTTGGAGTAGTTCTTGCAGAGCTTCTAACAGGTGCCAAACCTCTTTCTTTTAACAGGCCAGAAGAGACCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAACTTTTTGATGCTATTCAAGTTGGAATTTTCAATGATGAAAACAAGAAAGAGATTAAGGAGGTTTCTATTCTTGCTGCAAGGTGTTTAAGACTTAGAGGTGATGAAAGACCTAGTATGAGGGAAGTAGCTATGGAGTTGGATGGCATAAGGTTAATGGAGAAGCATCCTTGGAATGATACAGAGCAAAATTTTGAGGAGAGTCAACGCTTACTTCATGAGGCATCTTGTAGTATCTACAATGAAACTGATGATAGCTATAACCCTGGATATAGTGGGTATGATAGCTTGAAAGATCAGCCATTGATTGTCTTGGATGATGGAAGATGA 2223 0.3716 MKLNRNLTQLCTILVVTISMVTIVFASNESLSSSLPGCKNTCGNVKIPFPFGISDSSIPNQGPCYLEHKFELICENDTKLLWGNVQVHNINILQGELEVSFFVSGYCGGENSNVPTLDTAVFRISSTENKFITVGCDSYGYLNSIYNEETYSTGCLTRCYGNRNQIENGTCSGIGCCQVDIPHMMRNISVQVSDFPNSTDSLGCSYSFVVKDGSYNFTVSHLDNFPYKMLPLILDWSVGKTCKEDEYACKKNSDCIDVDIDFGYQCKCKEGYEGNPYHPDGCIDIDECKTLNNTCISESHCRNTDGFYECFCPNGQSGNGTLEGGCHRRDIVTKVAIGSSAGLIVLFVAVSSLYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTREDTSQSAQIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPDNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQNCKDKANNPAWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGAKPLSFNRPEETISLAMHFLSCLKQDKLFDAIQVGIFNDENKKEIKEVSILAARCLRLRGDERPSMREVAMELDGIRLMEKHPWNDTEQNFEESQRLLHEASCSIYNETDDSYNPGYSGYDSLKDQPLIVLDDGR* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0820 740 SUPERFAMILY EGF/Laminin 284 319 - -
Mtr1g0820 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Mtr1g0820 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 19 708 - -
Mtr1g0820 740 Pfam Wall-associated receptor kinase galacturonan-binding 38 98 IPR025287 GO:0030247
Mtr1g0820 740 Pfam Protein kinase domain 409 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0820 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 708 IPR045274 GO:0007166
Mtr1g0820 740 Gene3D Transferase(Phosphotransferase) domain 1 483 706 - -
Mtr1g0820 740 Gene3D Phosphorylase Kinase; domain 1 373 482 - -
Mtr1g0820 740 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Mtr1g0820 740 Gene3D Laminin 240 324 - -
Mtr1g0820 740 ProSitePatterns Calcium-binding EGF-like domain signature. 284 310 IPR018097 GO:0005509
Mtr1g0820 740 SMART serkin_6 407 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0820 740 Pfam Calcium-binding EGF domain 284 326 IPR001881 GO:0005509
Mtr1g0820 740 SMART egf_5 287 327 IPR000742 -
Mtr1g0820 740 SMART egf_5 241 283 IPR000742 -
Mtr1g0820 740 ProSiteProfiles Protein kinase domain profile. 407 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0820 740 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Mtr1g0820 740 SMART egfca_6 284 327 IPR001881 GO:0005509
Mtr1g0820 740 CDD STKc_IRAK 413 681 - -
Mtr1g0820 740 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
Mtr1g0820 740 ProSiteProfiles EGF-like domain profile. 284 322 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0820 Mtr-Chr1 9292213 9295256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0820 38 740 Receptor kinase-like Gene Family AT1G21230 44.780 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0820 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0820 - - gsj:114381577 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0820 1 9292213 9295256 Mtr3g3012 3 44052219 44059362 PCT