Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0818 ATGAAACAGAACACAAACCTCACGCAATTATGCACAATTTTAGTACTTACAATATCCATGGTCACAATAGTATTTGCATCCAATGAATCCTTTTCTTTATCCCTACCTGGGTGCAAAGACACATGTGGAAATGTAAAAATTCCATATCCATTTGGAATATCCAATTCATCAATACCAAATCAAGGTCCCTGTTACCTAGAGCGCAAATTTGAACTCATATGTGAGAATGACAAAAAATTAATTTGGGGCAATCTAGAAATTTCCAACATAAGCGTCATCGAAGGACACGTTGAAGCGTGGTTTTTCGTTTCTAGCTATTGTGGTAGCGAAAATGTAACTCATTTCGCCAGATTAGGCAGTACTTCCGGGGTCAGCATATCACCCAGAGAAAATAAGTTCTTAACAGTTGGTTGTAACAGTCTCGGTGTTCTCAGAAGCATTTACGACAAAGAAAGATATTACACCGGCTGCTTAACAATATGCAACGGTACTCGAAACAGAATTGAAAACGGAGCATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACCTATGATGAGGAATATAACTATACAAGCTTCTAATTATCTCGATTTAAACGAATCTTTGGGATGTAGCAATTCGTTTGTTGTTAAAAATGGATTTTATAATTTCACTGTTTCTGATTTGGACAATTTTCCTTATGAGAGGCTTCCTATGATTCTTGACTGGAGTGTTGGAAGTAAATATTGTAATGCTTCAAAGAATGAAGATGATTATGCTTGCAGGAATAATAGTGATTGTTATGATAAGGACATTGATTTTGGTTACCGATGTAAATGTAAGCATGGTTATGAAGGAAATCCGTATCATCCAGATGGCTGCACAGACATCGATGAATGTAAGTCACCAACTAACACATGCATAAATGAAGATCATTGTCGCAACAAGGATGGGTTCTATGAATGTTTCTGTCCTGATGGACAATCTGGAAATGGAACAAAGGAAGGAGGGTGTCATAGACGAGATGTTATTACCAAGGTTGCCATTGGAGCAAGTGCTGGAATCATTATTCTATTTGTGGTGATTTCTTCTCTATACTTGACATACCAAAAAAGGAAACTCATCAAGCTCAAGCAAAAATTCTTTCAAAAAAATGGTGGTTCCATTTTGCTACAACAACTGTCTACAAGTGAAGACACTTCGCAAGCAGCTCAAATATTCACAGAAGAGGAACTTAAGAAAGCCACCAAAAACTACGATGAAAGCTTAATCATTGGCAGAGGAGGTTTTGGTACAGTTTACAAAGGAGTTTTACCTGACAACAAAATCGTCGCTGTAAAAAAATCCAAAATAATTGACGCAAATCAAATTGAGCAATTCATTAATGAGGTAGTTGTTCTGACCCAAATAAATCATAGGAATGTTGTCAAACTCCTAGGGTGTTGTCTAGAGACAGAAGTTCCTTCATTGGTGTACGAATTTGTTAGCAACGGTACACTTTTCGATTTCATACAAAGCACTAAAGATAAAACAAATAATCCAACATGGAAAACCCGCTTAAGGATAGCAGCAGAGACAGCTGGAGCTTTATCGTATCTACATTCATCTGCATCAATTCCAATTATCCATAGAGATGTTAAGAGTACCAACATTCTCTTGGATGACAATTACACTGCCAAAGTTTCCGACTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACAGAGATAGCAACAATGGTGCAAGGAACACTTGGATACTTAGATCCCGAGTATATGCAAACACATAAATTAACCGAAAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGCAGAGCTTCTAACAGGTGACAAACCTCTTTCTTTTAATAGGCCAGAAGAGACCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAATTTTTTGAAGCTATTCAAGTTGGATTTGTGAACGATGATAACAAGAAAGAGATTAAGGAGGTTGCTATTCTTGCTTCAAGGTGTTTAAGACTTAGAGGGGATGAAAGACCTTGTATGAAGGAAGTGGCAATGGAGTTGGATGGCATAAGGTTAATGGAGAAGCATCCTTGGAATGATACAGAGCAAAATTTTGAGGAGAGTCAACGCTTACTTCATGAGGCATCTTGTAGTATTTATAATGAAACTGGTGATAGCTATAACCTTGGATATAATGGATATGATAGCTTGAAAGATCAATCATTGATTGCCTTGGATGATGGAAAAAGGCAAGGAACAATGGAAATGAAGACAAAGATATCACAACTATGCCAAATTTTAATTGTTGCAATATCCATGGTAAGAGTATTTGCATCCGATGAGTCTCTTCCTTCATCCCTGCCCGGTTGCAAAAACACATGTGGACATGTCAAAATTCCATACCCTTTTGGAATATCCAATTCATCAATACCAAACCAAGGACCATGTTTTCTAGAGCCCAAATTCAATCTTACATGTGTAAACGACACAAAATTATTGTTAGGCAATTTACAAGTTTCCAACATAAACATTCTTGAAGGACAACTTGAATTGTCGTTTTTTGTTGGAGGTTATTGTAATAGCACAAATTACAATCGACCCACGTTAGGCACTGCCAGTTACACCATATCAAGAAAGGAAAACAAGTTTGTAACTGTTGGTTGTGATAGTTATGGTTATCTCAACAGCATTTACAATCAAGAAACATATTCAACCGGTTGCTTAACAAGATGTAACGGTAATCGAAATCGAATCGAAAATGGAACATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACCTATGATGAGGAATATAAGTGTACAAGCTTTTGATTTTCCTAATTCCACGGATTCTTTAGGGTGTAGTTATTCATTTGTTGTTAAAGATGGATTTTATAATTTCACTGTTGATCATTTGGATATATTTCCCTATAAGATGCTTCCTTTGGTTCTTGATTGGAGTGTTGGAAGTGAAAATTGTAAGGCTTCAAAGGGTAAAGATGGTTATGCTTGCATGAAGAATAGTGATTGTGATGATGAAGACATTGGTTTTGGTTATCGATGTAAATGTAAGGAAGGTTATGAAGGAGACCCATATCATCCAGAAGGATGCATAGACATCGACGAATGTAAAACTTCAAATAACACATGTATAGATGAAAGTCACTGTCGCAACACGGATGGATTATATGAATGTTTCTGTCCTGATGGACAATCTGGAAATGGAACACTTGAAGGAGGTTGTCATAGACGAGATATTGTTATCAAGGTTGCCATTGGAGCAAGTGCTGGAATCATTATTCTATTTGTGGCGATTTCAGTTCTATACTTGACGTACCAAAAAAGGAAATTAATCAAACTAAAGCAAAAATTCTTTCAAAAAAACGGAGGTTCTATATTGCTACAACAGCTATCAACAAGAGAAGACACTTCGCAATCAGCTCAAATATTCACAGAAGAGGAACTAAAGAAAGCCACCAAAAACTACGATGATAGCTTAATCATCGGCAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGTCTTACCAGATAACAAAATCGTCGCTGTCAAAAAATCCAAAATAATAGATGCAAATCAAATTGAGCAGTTCATTAACGAGGTAGTTGTTCTGTCCCAAATAAATCATAGAAATGTTGTCAAACTCTTGGGATGTTGTTTAGAGACAGAAGTTCCTTCGTTGGTGTATGAATTCGTTAGCAATGGTACACTTTTCGATTTCATACATAATACTAAAGATAAAGCAAACAATCCAACATGGAAAACACGTTTAAAGATAGCAGCAGAGACAGCCGGAGCTTTATCGTATTTACATTCATCTGCATCAATACCTATTATCCATAGAGATGTTAAGAGTACCAACATTCTCTTAGATGACAATTACAATGCAAAAGTTTCTGATTTTGGAGCTTCGAGGTTGGTTCCACTTGATCAAACCGAGATAGCAACAATGGTACAAGGAACTCTTGGTTACTTAGATCCGGAGTATATGCAAACACATCAACTAACAGAGAAAAGTGATGTTTATAGCTTTGGTGTAGTTCTTGCAGAGCTTCTTACGGGAGACAAACCTCTTTCTTTTAATAGGCCAGAAGAGAATATCAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAGAATTTTTGAAGCTATTCAAGTTGGTATTTTAAATGATGAAAACAAGGAGGAGATTAAGGAGGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTAAGAGGGGATGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAGTTGGATGGTATAAGGTTAATGGAGAACCATCCTTGGAATGATTCAGAGCTAAATTTTGAGGAGAGACAACACTTACTTAAAGAGGCATCTTCTAGTATTTATAATGAAATTGGTGAAAGCATTAACCTTGGATATAGTGGGTATGATAGCTTGAAAGATCAACCATTGATTGCCTTAGATGATGGAAGATGA 4488 0.3668 MKQNTNLTQLCTILVLTISMVTIVFASNESFSLSLPGCKDTCGNVKIPYPFGISNSSIPNQGPCYLERKFELICENDKKLIWGNLEISNISVIEGHVEAWFFVSSYCGSENVTHFARLGSTSGVSISPRENKFLTVGCNSLGVLRSIYDKERYYTGCLTICNGTRNRIENGACSGIGCCQVDIPPMMRNITIQASNYLDLNESLGCSNSFVVKNGFYNFTVSDLDNFPYERLPMILDWSVGSKYCNASKNEDDYACRNNSDCYDKDIDFGYRCKCKHGYEGNPYHPDGCTDIDECKSPTNTCINEDHCRNKDGFYECFCPDGQSGNGTKEGGCHRRDVITKVAIGASAGIIILFVVISSLYLTYQKRKLIKLKQKFFQKNGGSILLQQLSTSEDTSQAAQIFTEEELKKATKNYDESLIIGRGGFGTVYKGVLPDNKIVAVKKSKIIDANQIEQFINEVVVLTQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQSTKDKTNNPTWKTRLRIAAETAGALSYLHSSASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHKLTEKSDVYSFGVVLAELLTGDKPLSFNRPEETISLAMHFLSCLKQDKFFEAIQVGFVNDDNKKEIKEVAILASRCLRLRGDERPCMKEVAMELDGIRLMEKHPWNDTEQNFEESQRLLHEASCSIYNETGDSYNLGYNGYDSLKDQSLIALDDGKRQGTMEMKTKISQLCQILIVAISMVRVFASDESLPSSLPGCKNTCGHVKIPYPFGISNSSIPNQGPCFLEPKFNLTCVNDTKLLLGNLQVSNINILEGQLELSFFVGGYCNSTNYNRPTLGTASYTISRKENKFVTVGCDSYGYLNSIYNQETYSTGCLTRCNGNRNRIENGTCSGIGCCQVDIPPMMRNISVQAFDFPNSTDSLGCSYSFVVKDGFYNFTVDHLDIFPYKMLPLVLDWSVGSENCKASKGKDGYACMKNSDCDDEDIGFGYRCKCKEGYEGDPYHPEGCIDIDECKTSNNTCIDESHCRNTDGLYECFCPDGQSGNGTLEGGCHRRDIVIKVAIGASAGIIILFVAISVLYLTYQKRKLIKLKQKFFQKNGGSILLQQLSTREDTSQSAQIFTEEELKKATKNYDDSLIIGRGGFGTVFKGVLPDNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIHNTKDKANNPTWKTRLKIAAETAGALSYLHSSASIPIIHRDVKSTNILLDDNYNAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEENISLAMHFLSCLKQDRIFEAIQVGILNDENKEEIKEVAILAARCLRLRGDERPSMKEVAMELDGIRLMENHPWNDSELNFEERQHLLKEASSSIYNEIGESINLGYSGYDSLKDQPLIALDDGR* 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0818 1495 CDD STKc_IRAK 420 688 - -
Mtr1g0818 1495 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 758 1463 IPR045274 GO:0007166
Mtr1g0818 1495 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 714 IPR045274 GO:0007166
Mtr1g0818 1495 Pfam Calcium-binding EGF domain 1039 1081 IPR001881 GO:0005509
Mtr1g0818 1495 Pfam Calcium-binding EGF domain 291 333 IPR001881 GO:0005509
Mtr1g0818 1495 Gene3D Laminin 243 292 - -
Mtr1g0818 1495 Gene3D Laminin 991 1042 - -
Mtr1g0818 1495 Gene3D Phosphorylase Kinase; domain 1 1128 1237 - -
Mtr1g0818 1495 Gene3D Phosphorylase Kinase; domain 1 379 489 - -
Mtr1g0818 1495 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Mtr1g0818 1495 SUPERFAMILY Protein kinase-like (PK-like) 1143 1433 IPR011009 -
Mtr1g0818 1495 Pfam Protein kinase domain 416 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 Pfam Protein kinase domain 1165 1429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Mtr1g0818 1495 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 1056 1067 IPR000152 -
Mtr1g0818 1495 CDD STKc_IRAK 1168 1436 - -
Mtr1g0818 1495 ProSitePatterns Protein kinases ATP-binding region signature. 1168 1191 IPR017441 GO:0005524
Mtr1g0818 1495 Gene3D Laminin 293 330 - -
Mtr1g0818 1495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1284 1296 IPR008271 GO:0004672|GO:0006468
Mtr1g0818 1495 Gene3D Laminin 1043 1080 - -
Mtr1g0818 1495 ProSiteProfiles EGF-like domain profile. 1039 1077 IPR000742 -
Mtr1g0818 1495 ProSiteProfiles Protein kinase domain profile. 414 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 SMART egfca_6 1039 1082 IPR001881 GO:0005509
Mtr1g0818 1495 SMART egfca_6 291 334 IPR001881 GO:0005509
Mtr1g0818 1495 SUPERFAMILY Protein kinase-like (PK-like) 395 684 IPR011009 -
Mtr1g0818 1495 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Mtr1g0818 1495 ProSiteProfiles Protein kinase domain profile. 1162 1445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 ProSitePatterns Calcium-binding EGF-like domain signature. 1039 1065 IPR018097 GO:0005509
Mtr1g0818 1495 Gene3D Transferase(Phosphotransferase) domain 1 490 712 - -
Mtr1g0818 1495 Gene3D Transferase(Phosphotransferase) domain 1 1238 1457 - -
Mtr1g0818 1495 Pfam Wall-associated receptor kinase galacturonan-binding 788 846 IPR025287 GO:0030247
Mtr1g0818 1495 Pfam Wall-associated receptor kinase galacturonan-binding 38 92 IPR025287 GO:0030247
Mtr1g0818 1495 ProSitePatterns Calcium-binding EGF-like domain signature. 291 317 IPR018097 GO:0005509
Mtr1g0818 1495 SUPERFAMILY EGF/Laminin 1039 1074 - -
Mtr1g0818 1495 SUPERFAMILY EGF/Laminin 291 326 - -
Mtr1g0818 1495 SMART egf_5 244 290 IPR000742 -
Mtr1g0818 1495 SMART egf_5 992 1038 IPR000742 -
Mtr1g0818 1495 SMART egf_5 1042 1082 IPR000742 -
Mtr1g0818 1495 SMART egf_5 294 334 IPR000742 -
Mtr1g0818 1495 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Mtr1g0818 1495 SMART serkin_6 1162 1439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 SMART serkin_6 414 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0818 1495 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 19 714 - -
Mtr1g0818 1495 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 758 1463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0818 Mtr-Chr1 9245820 9259854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0818 38 747 Receptor kinase-like Gene Family AT1G21230 44.110 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0818 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0818 - - gsj:114381577 1805.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3009 3 44027513 44030845 Mtr1g0818 1 9245820 9259854 PCT