Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0815 ATGGCAGGAGCACATACTACGATGATTATACTATCGATTCTTCTGAATCTCCAGCTTTTCAATAGCAGCAGCTATCATGACGAGTCGACAGAATTGTCCTGTGGAACTAACGAGCCGGTTATTCGATGCCCATTCCAACTCGTTAAGGAATCATCACAAGATCAATGTGTTTATCCTGAGTTTTGCCTGTATTGTACAAATCAGAAAACCATGATTTCGCTTCCTACAACTTCAGGTCCAGTTCAATTCTTTGTCTCTGAAATTGACTACAAGTTACAAATTATTTCATTTTCCGACCCGGACAATTGCCTTCCAAAGATGTTACCAAAGCTTAACACTTCATCATTCCAATTTTACAAATTTGATACAAAATTAGCAACAACTGTAGTCTTCTTCAACTGCTCTTCGGTTAGGAAACGACACCTGAGAAACTACGATCAATTATTCCAAGGGTCACAAGATATGATCACATGTCCAATTTACGCTGCTGATTCCAAAGACAGTATCCTCACATTGGACCTTTTATCATGTACCAAGATGTTCAACTTCAATGCATCGATCGTGGTATCAAACCTGACGTTAAATCGTCTTAGTTTGAGTTGGCCAAATCCAAATTGTACTGTCTGTGAGGCGAAAGGCATGAAATGTAGATGGAATAACAACGGCACCAAATGTGACATTGAATGTTTCCACTGCAACAACAAACAGAAAAAATTTCAAATAAAAAAATATCATGTTTTGGCTACAATAGGTTCAATTTTATTGGGGTTGCTCACCATTGCATTTATAAAGATTTATCTACATTTCAGAGAAAAAGAAGAAGATCAAGTTAGAGTTGATAGGTTTTTAGAGGATTATAGAGCACAAAAGCCTGCCAGATTTTCATATTCTGATATAAAAAGAATCACTAGTGGGTTTAAGGAAAAGTTAGGAGAAGGAGCACACGGAACCGTGTTTAAAGGAAAACTCTCTAGTGAGATTCTGGTGGCTGTGAAGATTCTCAACAATACACAGGGAGAAGGGATAGAGTTTATCACAGAAGTGGAAATTATGGGTACAATCCACCACATTAACGTGGTTCGCTTGCTTGGCTACTGCGCAGATGGAATCCATCGAGCTCTTGTATACAATTTGTTTCCAAAAGGTTCGCTACAATGCTTCATATTTCCACCGGATGACAAGGATCATTTCATGGGGTGGGAGAAGCTACAACTAATTAGTCTTGGTGTAGCAAAAGGAATTGAGTATCTTCATGAGGGTTGTAGCCATCCAATTCTTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGACACCTTCACTCCAAAAATTTCAGACTTTGGACTCGCCAAATTATGTTCAAAGAATGTTAGTGTTGTATCCATGACTGCGGCTAGAGGAACCTTGGGATATATGGCACCTGAAGTTTTGTCACGAAATTTTGGAAATGTTTCTCGTAAGTCTGATATTTATAGTTATGGGATGTTGTTGCTGGAATTGGTTGGAGGACGCAAGAATGTAGATTCCTTGTCTGATGAAAATTTCCATGTTTTATATCCAGAATGGATTCATAACCTATTGGAAGGAGATACACATATAAATATTGAAGATGAGGATGATATTAAAATTGCAAAGAAACTCGCAATTGTTGGACTTTGGTGTATTCAATGGCAGCCAATAAATCGTCCCTCCATAAAAGCTGTGATACAAATGTTGGAGACAGCAGATTACAATCGGTTAACTTTTCCACCCAATCCTTTTCATTCTAGTACTTCTGTTAATACTACTGGATGCTCTTTGGCAAGACAAACTTTTCAAATGGAAGTGATTCAAGAATAA 1842 0.3795 MAGAHTTMIILSILLNLQLFNSSSYHDESTELSCGTNEPVIRCPFQLVKESSQDQCVYPEFCLYCTNQKTMISLPTTSGPVQFFVSEIDYKLQIISFSDPDNCLPKMLPKLNTSSFQFYKFDTKLATTVVFFNCSSVRKRHLRNYDQLFQGSQDMITCPIYAADSKDSILTLDLLSCTKMFNFNASIVVSNLTLNRLSLSWPNPNCTVCEAKGMKCRWNNNGTKCDIECFHCNNKQKKFQIKKYHVLATIGSILLGLLTIAFIKIYLHFREKEEDQVRVDRFLEDYRAQKPARFSYSDIKRITSGFKEKLGEGAHGTVFKGKLSSEILVAVKILNNTQGEGIEFITEVEIMGTIHHINVVRLLGYCADGIHRALVYNLFPKGSLQCFIFPPDDKDHFMGWEKLQLISLGVAKGIEYLHEGCSHPILHFDINPHNVLLDDTFTPKISDFGLAKLCSKNVSVVSMTAARGTLGYMAPEVLSRNFGNVSRKSDIYSYGMLLLELVGGRKNVDSLSDENFHVLYPEWIHNLLEGDTHINIEDEDDIKIAKKLAIVGLWCIQWQPINRPSIKAVIQMLETADYNRLTFPPNPFHSSTSVNTTGCSLARQTFQMEVIQE* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0815 613 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 613 IPR045874 GO:0004672
Mtr1g0815 613 SUPERFAMILY Protein kinase-like (PK-like) 288 577 IPR011009 -
Mtr1g0815 613 Pfam Protein kinase domain 307 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0815 613 Gene3D Phosphorylase Kinase; domain 1 278 378 - -
Mtr1g0815 613 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mtr1g0815 613 PANTHER RECEPTOR-LIKE KINASE 16 613 - -
Mtr1g0815 613 ProSiteProfiles Protein kinase domain profile. 304 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0815 613 Pfam Wall-associated receptor kinase galacturonan-binding 33 98 IPR025287 GO:0030247
Mtr1g0815 613 Gene3D Transferase(Phosphotransferase) domain 1 379 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0815 Mtr-Chr1 9209284 9211538 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0815 29 587 Receptor kinase-like Gene Family AT1G66910 32.686 8.71e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0815 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0815 - - gmx:100811907 797.734