Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0812 ATGCTACTGATTCTTCTGAATCTCCAGCTTATCAATAGCAGCAGCTATCATGACGAGTGGACAGAATTGTCCTGTGGACCTAACGAGCCGATTATTCGATTCCCATTCCAACTCGTTAAGGAATCATCACAAGATCAATGTGTTTATCCTGAGTTTTGCTTATATTGTACTAAAAATAAGAGAACCATGATTGTGCTCTCTTCCAATTCAGGTCCAATCAAATTCTTTGTTACTCAAATTATGTACGAATATGTAAAAATTTATATTTCGGACCCGGATAATTGCTTTCCAAAAATGTTTCTGGATCGGAAACTTAACAATTCATCATTTCTTCCTTATTACCGATTTCCTGAAGAATCAGAATCAACAGTAGCCTTTTTCAACTGCTCTTCGGTTAAGAAACGACATTTGAGAAACCAATATCAGATAAACAAAGATTCACAAGATATGATCACTTGTCCAATTTACGCTTCTTATTCTGATGAAAGTGTCGTCAAGTTGGACCTTGCATCATGTACCAAGATGATTGAAGTCAGCGCAACTATCGATGCAAATCACCTGTCGACTAATAGCTTCTCTTTGAGTTGGCACAAAACAAATTGTGATGTATGTGAAGCAAAAGGCATGAAATGTAGATGGAACACCAACAGCTCCAAACGTGACATTGAATGTTTTAACCGCAAAAGAATACGGAAAACTATCTATATTCCAAACTCTCTTATTTTTGCTAGTACCGGGTCAATTATATTGGGGTTGGTCATCATTGCAATTACAAAGATTTATCTACATTTTAGGGGAAAAAAAGAAGATCAAGTTAGAATTGATAAGTTTTTAGATGATTTTAGAGCACAAAAGCCTGCTAGATTTTCCTATGCTGATATAAAAACAATCACAGGTGGGTTTAAGGAGAAACTTGGAGAAGGAGCTCACGGAACAGTGTTTAAGGGAAAACTCTCTAGTGATATTCTGGTGGCTGTGAAAATTCTCAACAATACACAGGGAGAAGGTAAAGAGTTCATCACTGAAGTAGAAATTATGGGAAAAATACACCATATCAACGTGGTTCGGTTGCTTGGATTTTGCGCAGAGCTAGGGAATCCATCGTGCTCTTGTATACAATTTGTTTCCAAAAGGTTCACTACAAAGCTTCATATTTTCACCTGA 1164 0.3677 MLLILLNLQLINSSSYHDEWTELSCGPNEPIIRFPFQLVKESSQDQCVYPEFCLYCTKNKRTMIVLSSNSGPIKFFVTQIMYEYVKIYISDPDNCFPKMFLDRKLNNSSFLPYYRFPEESESTVAFFNCSSVKKRHLRNQYQINKDSQDMITCPIYASYSDESVVKLDLASCTKMIEVSATIDANHLSTNSFSLSWHKTNCDVCEAKGMKCRWNTNSSKRDIECFNRKRIRKTIYIPNSLIFASTGSIILGLVIIAITKIYLHFRGKKEDQVRIDKFLDDFRAQKPARFSYADIKTITGGFKEKLGEGAHGTVFKGKLSSDILVAVKILNNTQGEGKEFITEVEIMGKIHHINVVRLLGFCAELGNPSCSCIQFVSKRFTTKLHIFT* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0812 387 Gene3D Phosphorylase Kinase; domain 1 274 369 - -
Mtr1g0812 387 ProSiteProfiles Protein kinase domain profile. 299 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0812 387 Pfam Protein tyrosine and serine/threonine kinase 301 367 IPR001245 GO:0004672|GO:0006468
Mtr1g0812 387 Pfam Wall-associated receptor kinase galacturonan-binding 24 91 IPR025287 GO:0030247
Mtr1g0812 387 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Mtr1g0812 387 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 363 IPR045874 GO:0004672
Mtr1g0812 387 PANTHER RECEPTOR-LIKE KINASE 10 363 - -
Mtr1g0812 387 SUPERFAMILY Protein kinase-like (PK-like) 283 365 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0812 Mtr-Chr1 9170937 9172244 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0812 23 363 Receptor kinase-like Gene Family AT1G66910 25.648 4.54e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0812 PK_Tyr_Ser-Thr 1.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0812 - - mtr:MTR_1g027420 675.626