Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0811 CACGGATCACTTCATGGGGTGGGAGAAGCTGCACAAATTAGTCTTGGTATCGCAAAAGGAATCGAGTATCTTCATGAGGGTTGTAGCCATCCAATCCTGCACTTTGACATTAACCCTCACAATGTTTTGCTAGATGAAACCTTCACTCCAAAAATTTCAGACTTTGGACTCGCCAAATTATGTTCCAAGAATATTAGTGTAGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATATATGGCGCCTGAAGTTTTGTCACGAAATTTTGGGAATGTTTCTCTTAAGTCTGATATTTATAGTTATGGGATGTTGTTGCTAGAGATGGTTGGTGGAAGGAAGAATGTAGACTCATCATCTGCAGAAACTTTCCATAGTTTATACCGAGAATGGATTTATAATTTATTGGAAGGAGACATATATATGAATATTGAAGACGAAGGTGATGCGAAGTTTGCAAAGAAACTCGCAATTGTCGGACTTTGGTGCATTCAGTGGCAGCCAATGAATCGTCCTTCCATTAAAACCGTCATACAAATGTTGGAAACAGAAGATGACAGCCAATTAACTTTTCCACCTAATCCTTTTCATTCCACAAATTCCATTACCACCAGTGAAGGCTCTTTAGCAAGACGACCTTTTCAATTTCAAATGGAAGTGATTCAAGAATAA 669 0.3946 HGSLHGVGEAAQISLGIAKGIEYLHEGCSHPILHFDINPHNVLLDETFTPKISDFGLAKLCSKNISVVSMTAARGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDSSSAETFHSLYREWIYNLLEGDIYMNIEDEGDAKFAKKLAIVGLWCIQWQPMNRPSIKTVIQMLETEDDSQLTFPPNPFHSTNSITTSEGSLARRPFQFQMEVIQE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0811 222 PANTHER RECEPTOR-LIKE KINASE 9 222 - -
Mtr1g0811 222 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 222 IPR045874 GO:0004672
Mtr1g0811 222 Pfam Protein kinase domain 9 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0811 222 Gene3D Transferase(Phosphotransferase) domain 1 2 191 - -
Mtr1g0811 222 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0811 222 SUPERFAMILY Protein kinase-like (PK-like) 8 181 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0811 Mtr-Chr1 9170279 9170963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0811 12 194 Receptor kinase-like Gene Family AT5G38260 51.323 2.02e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0811 Pkinase 5.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0811 - - mtr:MTR_1g027420 434.876