Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0810 ATGTACTATGAAGGGGTATGGGCCATTGGACATTATGTTCTACCATCAATTCTGTTGGCTAGATTTCTATTTGGGATATCATTTTTTATCGCACTACTGATATACAAATGGCGAAAAAGACATTGGTCAATGTATGAATGTATTGAAATATATCTACAACATAACAACCTCATGCCCATTGGATATTCATACAAAGAAATCAAGAAAATGGCTAAAGGTTTCAAAGAAGAGTTGGGTAAAGGAGGGTTTGGCACTGTGTTCAAGGGAAACCTACGTAGTGGGCCTTGTGTGGCAATCAAGATGTTGGGTAAGTCAAAAGGTAATGGGCAAGACTTTATCAATGAAGTCACAACTATTGGAAGAATACATCATTTGAATGTTGTACAATTACTTGGATTTTGCATTGAGGGATCCAAACGTGCTCTTGTTTATGAATTCATGCCTAATGGATCTCTTGATAAATTTATTTTCTCTAAAGAAGGGAGCATAAATTTAAGCTACAACAAAATTTACGATATAGCAATTGGAGTAGCTCGTGGGATTGCTTATCTTCACCATGGATGTGAAATGAAGATTTTACATTTTGATATCAAGCCCCACAATATCTTGCTTGATGAGAACTTTATCCCTAAAATATCTGACTTTGGATTGGCAAAACTACACCCGATAGAGAATAGCGTCATCACAATGACTGCAGCAAGAGGTACAATTGGATATATGGCTCCTGAGTTATTCTACAAAAATATAGGGGGAGTGTCGTACAAGGCTGATGTTTATAGTTTTGGGATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAACCTGAACACCAAGGCAGAGCATTCAAGCCAACTTTATTTTCCCTTTTGGATATATGATCAACTTGGCAAACAAGGAGAAATAGAAATAGAAAATGTCGTAGAAGAGGATATGAAAATAGTAAAGAAAATGATCATGGTCGCTCTTTGGTGTATACAATTGAAACCAAATGATCGTCCTTCGATGAGTAGAGTAGTGGAGATGCTTGAAGGAGATATTGAAACTCTTGAAATGCCTCCAGAACCAACCATGTATCCAGATGAAGTAATTTCGAGGGATGAAATTACAACAAACTCAAATTAA 1122 0.3672 MYYEGVWAIGHYVLPSILLARFLFGISFFIALLIYKWRKRHWSMYECIEIYLQHNNLMPIGYSYKEIKKMAKGFKEELGKGGFGTVFKGNLRSGPCVAIKMLGKSKGNGQDFINEVTTIGRIHHLNVVQLLGFCIEGSKRALVYEFMPNGSLDKFIFSKEGSINLSYNKIYDIAIGVARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLHPIENSVITMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRKNLNTKAEHSSQLYFPFWIYDQLGKQGEIEIENVVEEDMKIVKKMIMVALWCIQLKPNDRPSMSRVVEMLEGDIETLEMPPEPTMYPDEVISRDEITTNSN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0810 373 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 2 365 - -
Mtr1g0810 373 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 365 IPR045874 GO:0004672
Mtr1g0810 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mtr1g0810 373 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0810 373 Gene3D Phosphorylase Kinase; domain 1 50 146 - -
Mtr1g0810 373 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Mtr1g0810 373 SUPERFAMILY Protein kinase-like (PK-like) 57 343 IPR011009 -
Mtr1g0810 373 Pfam Protein tyrosine and serine/threonine kinase 74 342 IPR001245 GO:0004672|GO:0006468
Mtr1g0810 373 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0810 373 Gene3D Transferase(Phosphotransferase) domain 1 147 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0810 Mtr-Chr1 9166521 9167734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0810 62 357 Receptor kinase-like Gene Family AT4G18250 53.571 1.88e-112 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0810 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0810 - - mtr:MTR_1g027440 634.795