Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0808 ATGGCAGAAACACATACTACTTTGATCATGCAACTTCTTATGATCTTGCTTATCAAAAGTGGCAATGCTCATGACCAGTGCAGAGAATCATATTGTGGACCTAACCAACCTCTTATTAAATTTCCCTTCCAAATCGTTAAGGAATCATCACAAGATCAATGTGTTTATCCTAAAGAGTTCTGCCTATATTGTACTGAAAATAAGAAAACCATGATAGTTCTCTCTACCTCTTCAGGTCCAATCAAATTCCATGTCTCTGATATTGACTACGAATCACACTCGATGTCAATATCAGACCCAGACAATTGCCTTCCAAAAAAGTTTTTGATACTCAACAATTCATCATTTCGACCTTACCGGTTTGATTCTGAACTGGATATCAAAATCTTCTTCTTCAACTGCTTTTCAGTTAGGAAACAACACTTGAGAAACCAATATCAGACATCCCAAGAGTCACAAGATATGATCACTTGTCCAATTTATGTTGCTGATTCGGACGAAGATATCGTTGATTTGGACCTTCTATCTTGTACTAAGATGTTCGACGTCAACGCGTCTATGATGGGATCAGACCTGAGGTATAATTTTCTCAGATTGAGTTGGCCCAAACAAAGTTGTGCAAAGTGCGAGTCAAAAGGCATGAAATGCAAATGGATGAACAACACCACCAAACCTGGCATTGAATGTTTTTATTGCAACCAAAAACATAAAAAATTTCAGCCTCCAAAAGCTCTTATTTTTTCGGCTATAGGTTCAATTATATTGGGAATGGGCACCATTGTATTTATTAAGATTTATCTGCATTTCAGAGAAAAAGAAGAAGATCAAGTTAGAATTGATAAGTTTTTAGAGGATTATAGAGCCCAAAAGCCTGCCAGATTTTCATACTCTGATATAAAAAGGATCACGAGTGGATTTAAGGAAAAGCTAGGAGAAGGAGCTCACGGATCGGTATTTAAAGGAAAACTCTCTAGTGAGATTCTAGTGGCTGTGAAGATTCTCAACAATACACAAGGAGAAGGGAAAGAGTTCATCACTGAAGTGGAAATTATGGGCAAAATTCACCATATCAATGTGGTTCGTTTGCTTGGCTTTTGCGCAGAAGGAGTTCACTGCGCTCTAGTATACAATTTTTTTTCGAAAGGTTCTCTGCAAAGCTTCATATTTCCACCGGATAACAAGGATTATTTCATGGGGTGGGAGAAGCTACAACAAATTAGTACTGGTATAGCAAAAGCAATCGAGTATCTTCATGAGGGCTGTAGCCATCCAATTATTCACTTTGACATCAACCCTCGCAATGTTTTGTTAGATGATTCCTTCACTCCAAAAATTTCTGACTTTGGGCTCGCCAAATTATGTGCCAAGAATCTTAGTATAGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATATATGGCACCCGAAGTAGTGTCTCGAAATTTTGGAAATGTTTCTCTTAAGTCTGATATATACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGAAAGAATGTAGATTCGTCATCTGCAGAAGATTTGCATGTTTTATACCCGGAATGGATTCATAACTTATTGGAAGGAGACATACATATAAATGTTGAAGATGAAGTTGGCAATGCTAAAATTGCAAGGAAACTTGCAATTGTCGGACTTTGGTGTATTCAGTGGCAGCCAATGAATCGTCCTTCCATTAAAACCGTCATACAAATGTTGGAAACAGAAGATGACAGCCAATTAACATTTCCGCCTAATCCATTTCATTCCACCAATTCCATTACCAGTAGTGAAGGTTCTTTGCCTAGACGGCCTCTCAAAATGGAAGCGATTCAAGAATGA 1845 0.3816 MAETHTTLIMQLLMILLIKSGNAHDQCRESYCGPNQPLIKFPFQIVKESSQDQCVYPKEFCLYCTENKKTMIVLSTSSGPIKFHVSDIDYESHSMSISDPDNCLPKKFLILNNSSFRPYRFDSELDIKIFFFNCFSVRKQHLRNQYQTSQESQDMITCPIYVADSDEDIVDLDLLSCTKMFDVNASMMGSDLRYNFLRLSWPKQSCAKCESKGMKCKWMNNTTKPGIECFYCNQKHKKFQPPKALIFSAIGSIILGMGTIVFIKIYLHFREKEEDQVRIDKFLEDYRAQKPARFSYSDIKRITSGFKEKLGEGAHGSVFKGKLSSEILVAVKILNNTQGEGKEFITEVEIMGKIHHINVVRLLGFCAEGVHCALVYNFFSKGSLQSFIFPPDNKDYFMGWEKLQQISTGIAKAIEYLHEGCSHPIIHFDINPRNVLLDDSFTPKISDFGLAKLCAKNLSIVSMTAARGTLGYMAPEVVSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDSSSAEDLHVLYPEWIHNLLEGDIHINVEDEVGNAKIARKLAIVGLWCIQWQPMNRPSIKTVIQMLETEDDSQLTFPPNPFHSTNSITSSEGSLPRRPLKMEAIQE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0808 614 PANTHER RECEPTOR-LIKE KINASE 14 614 - -
Mtr1g0808 614 Pfam Protein kinase domain 307 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0808 614 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 614 IPR045874 GO:0004672
Mtr1g0808 614 MobiDBLite consensus disorder prediction 585 614 - -
Mtr1g0808 614 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mtr1g0808 614 Gene3D Phosphorylase Kinase; domain 1 278 378 - -
Mtr1g0808 614 Gene3D Transferase(Phosphotransferase) domain 1 379 585 - -
Mtr1g0808 614 Pfam Wall-associated receptor kinase galacturonan-binding 27 99 IPR025287 GO:0030247
Mtr1g0808 614 ProSiteProfiles Protein kinase domain profile. 304 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0808 614 MobiDBLite consensus disorder prediction 585 601 - -
Mtr1g0808 614 SUPERFAMILY Protein kinase-like (PK-like) 287 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0808 Mtr-Chr1 9138836 9141224 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0808 16 588 Receptor kinase-like Gene Family AT1G66910 32.051 6.86e-89 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0808 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0808 - - gmx:100813531 822.772