Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0807 ATGTGGTGGGTGAGAGTGATATTGTTACTGTTGCTGCCATTTTCGTTTCTATTCTGGAAAGTTACTTGCAGTTCTAGTTATGAGCATGATTGTGCACTTTCATCTTGTGGCAAAATATCAAAAATAAGTTATCCATTTCGATTAAAAGATGATCCAATACACTGCGGTAACAGCAAGTATGAACTATCTTGTGAAAATAATGTGACAACTTTATATTTGTACTCCACAAAATATAATGTCCGTTCCATCAACTACAACAATTTTACAATCAGACTGGTTGATCCTGGAGTTCAAGAAATGAATTGCTCTTCACTTCCACGCCATTCGTTGTCTCGATCTAATTTCTGTGATACTTATGATTACCACAACAAATTTTGCAATGACCCATATCATGCTGTTTCATATAAAGAACGAATGTTCAGTGCCGGCACAGGTTCCCATGAACTTCTCTTTGAGCATATAGTTTACCTGAGTTGTACCAATCAAGTCACTAGCAATTCCAACTATGTGATTACTTCACCTTGTCTCAATCGACACTCCAAATCCAAAGGCAATTATATTTATGCTATAGTTGGTGATTTAACGGCTGAGGACTTTCAAGTTGGTTGTCATGTGAAATTGGTTACTCCCACTTCTTTGTCTGGTTTGCAAAGAAACGATCTTTCCTATGATGCCATTCACAAGGCGTTAGTCTATGGATTTGAGGTTTCATGGCTGCATCTTTCTTGCAAAAATCTTTGTCTAGATTTAGCGCCGTGCTTCTTCAACGCTTCTTCCAACGATCCAGAACTTCAATGCAATATAAATCCCCACTGCTATACTTTCATGGGATATTGGAGCAGTGGTGATTGTGGGTTATGGTCTCAGCTAACTTCATATGCTAAAGATACAATCACTGCTATCCGGATAGGACTAATTGAAATAATCAAAGGGCCAAACTCAATTTATGAAGGTCGTACAAACTATAAAGTAGGACTGGCCATAGGGCACTATGTTCTACCATTATTTTTGGGGACTAGATTTCTCTTTGGGATAACTTTTTTTACTGCGTTGCTGATATACAAGTGGCTAAAAAGACATTGGTCAATGTATGAATGTATCGAAATATATCTACAACAAAACAACCTCATGCCCATTGGATATTCATACAGAGAAATTAAGAAAATGGCTAGAGGATTCAAAGAGGAATTGGGTAAAGGAGGTTTTGGCACTGTCTTCAAAGGGAACCTTCGCAGCGGCCCTTGTGTGGCAATAAAGATGTTGGGCAAGTCCAAAGGTAATGGGCAAGACTTTATCAATGAAGTCACAACTATTGGAAGAATACATCATTTAAATGTGGTTCAATTACTTGGATTTTGCATTGAGGGGTCAAAACGAGCTCTTGTTTATGAATTTATGCGTAATGGATCTCTTGATAAATATATTTTCTCTAAAGAAGGGAGTATAAATTTAAGCTACAACCAATTGCACGATATTTCAATTGGAGTAGCTCGTGGGATTGATTATCTCCATAATGGATGTGAAATGAAAATTTTGCATTTTGATATCAAGCCACACAATATCCTACTTGACGAGAATTTTATTCCAAAGATATCTGACTTTGGACTCGCAAAGCTATATCCAATTACGAATAGCATTGTCACAATGACTGCAGCCAAAGGCACAATTGGATATATGGCTCCTGAATTGTTTTACAAAAATATTGGTGGAGTGTCGTATAAGGCTGATGTTTATAGTTTTGGTATGCTTTTGATGGAAATGGCAAGCAAGAGGAAAAACATGAACCCACATGCAGCGCATTCAAGCCAGCATTATTTTCCCTTTTGGATTTATGATCAACTTCAAAAAGAGGCAGAAATAGAACTAGAAGATGTTACAGAGGAGGATATAAAAATAGTAAAGAAGATGGTCATGGTCGCTCTTTGGTGTATACAAATTAACCCAAACGATCGCCCCTCCATGAGTAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAAACCTTGAAATGCCTTCGGAGCCAACTTTGTATCCAGATGAAATGATTTCATCGGATGAAACAACCAACTCCGACCAAAGAGTATCAAGTGACTTCATTAGTTCTAGTGATATTGGGGAAAACATAACTAGTCCTTCACTAGAGAATATTTCTTCAAAGATGTAA 2163 0.3736 MWWVRVILLLLLPFSFLFWKVTCSSSYEHDCALSSCGKISKISYPFRLKDDPIHCGNSKYELSCENNVTTLYLYSTKYNVRSINYNNFTIRLVDPGVQEMNCSSLPRHSLSRSNFCDTYDYHNKFCNDPYHAVSYKERMFSAGTGSHELLFEHIVYLSCTNQVTSNSNYVITSPCLNRHSKSKGNYIYAIVGDLTAEDFQVGCHVKLVTPTSLSGLQRNDLSYDAIHKALVYGFEVSWLHLSCKNLCLDLAPCFFNASSNDPELQCNINPHCYTFMGYWSSGDCGLWSQLTSYAKDTITAIRIGLIEIIKGPNSIYEGRTNYKVGLAIGHYVLPLFLGTRFLFGITFFTALLIYKWLKRHWSMYECIEIYLQQNNLMPIGYSYREIKKMARGFKEELGKGGFGTVFKGNLRSGPCVAIKMLGKSKGNGQDFINEVTTIGRIHHLNVVQLLGFCIEGSKRALVYEFMRNGSLDKYIFSKEGSINLSYNQLHDISIGVARGIDYLHNGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLYPITNSIVTMTAAKGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRKNMNPHAAHSSQHYFPFWIYDQLQKEAEIELEDVTEEDIKIVKKMVMVALWCIQINPNDRPSMSKVVEMLEGDIENLEMPSEPTLYPDEMISSDETTNSDQRVSSDFISSSDIGENITSPSLENISSKM* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0807 720 SMART serkin_6 391 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0807 720 Gene3D Transferase(Phosphotransferase) domain 1 466 673 - -
Mtr1g0807 720 Gene3D Phosphorylase Kinase; domain 1 370 465 - -
Mtr1g0807 720 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 689 - -
Mtr1g0807 720 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524
Mtr1g0807 720 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Mtr1g0807 720 SUPERFAMILY Protein kinase-like (PK-like) 377 662 IPR011009 -
Mtr1g0807 720 Pfam Protein tyrosine and serine/threonine kinase 393 661 IPR001245 GO:0004672|GO:0006468
Mtr1g0807 720 ProSiteProfiles Protein kinase domain profile. 391 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0807 720 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 689 IPR045874 GO:0004672
Mtr1g0807 720 MobiDBLite consensus disorder prediction 681 720 - -
Mtr1g0807 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Mtr1g0807 720 MobiDBLite consensus disorder prediction 672 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0807 Mtr-Chr1 9125814 9135629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0807 36 690 Receptor kinase-like Gene Family AT5G38260 36.622 3.71e-116 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0807 PK_Tyr_Ser-Thr 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0807 - - gmx:100305367 841.262