Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0804 ATGACATTGATACTCTTGTTGCCATTTACTCTTCTAATCCATCAAGTTACCTGTTGGAGTATAGCAACCATCAGTCCTATTGAGCAAGAGCATACATGTCCACCTTCATCTTGTGGCAAAATTTCCAACATAACTTACCCATTTCGATTAAATAATGACCCAATTAATTGCGGGGACAAAAGGTACGAATTAGCATGTGAAAATAATGTGACAACTTTAAATTTGTATTCAGGAAAATATCATGTGCAATCCATCAACTACAACAATTTCACAATCCGATTGGTTGATCTTGGAGTTCAACAATCTAATTGCTCTTCTATACCTCTTTATTCTTTGTCTCAATCTAATTTCTGTGATACCTATAATTATTACGGTCGCAATTGCAAAGACCCATACCATGCCGTATCTGATCAAGAACGACTTCTATATCCAGATATGGGTTCCCACGAACTTCTTTTTAAGCATATAGTTTACTTGAATTGTACCCATCAAGTAACTAACAATCCTAAATATGTGAATACTTCTTCCTGTTTCCAATTTGGTTACTCCAAAAGTAATTATATATATGCTATGGCTGGTGATTTAATTGCTCAAGATTTTCAAGTTGGTTGTCATGTGAAATTGGTTACTCCAACATCTTTGTTGGGTTTGGAAAGAAATAAGTTACTTTCCTATGATATCATTCACAAGGCATTAGTCTATGGATTTGAGATTTCATGGATGCATCTTTCTTGTCATAATCGTTGCGGAGATTTAGCAATATGCCTCTTCATCAATTCAACTAGCGACATACTTCAGTGCAGACCCTACTGCGGATCTTCTTGGGACTACATGGCTGGTTCGACTATCCGTAGTTGTGACACCTTCATAAAAGGATTATATGAACTTATAAAAGGATCAATCCCAGAGTATCTAGGTTTTGCTAACTTTAAAGTAGGATTTTCCATAGGACACTACGGTATACCGTCATTCTGTGCGGCTAGATTCCTCTTTGGGATGACATTGTTTATTGCATTGCTGATATACAAATGGAAAAGAAGTCATTTGTCAACGTATGAATGTATTGAAATATATCTACAACAACAAAACAACCTGATGCCCATCAGATACTCATACAAAGAAATTAAGAAAATGGCTCGAGGTTTCAAAGATAAGTTGGGTGAAGGAGGCTTCGGCACTGTATTTAAGGGGAACCTACGTAGTGGTCCTTGTGTGGCAATAAAGATGTTGGGTAAATCGAAAGGTAATGGGAAAGATTTTATTAGTGAAGTCTCAACCATCGGAAGAATATATCATTTGAATGTGGTACGATTACTTGGATTTTGTATCGAGGGATCGAAACGTGCTCTTGTTTATGAATTCATGCCTAATGGATCACTTGATAAATTTATTTTCTCTAAAGAAGGAAGTGTAAATATAAGCTATAGCCAAATTTTTGACATATCAGTTGGAGTAGCTCGTGGGATTGCTTATCTCCACCATGGATGCGAAATGAAGATTTTACATTTTGATATCAAGCCTCACAACATCCTTCTTGATGAAAACTTCACACCAAAAGTCTCTGACTTCGGATTGGCTAAGCTATATCCCGTGGAGAATAGCATTGTCACAATGACTGCGGCAAGAGGTACCATTGGATATATGGCTCCAGAATTGTTCTATAAAAATATTGGGGGAGTGTCTTATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATGGAGATGGCAGGTAAAAGGAAAAACCTAAATGTCCAAGCGGAGCATTCAAGTCAGCTTTATTTTCCTTTATGGATTTATGATCAATTTGGACAAGAGGGAGAAATAGAAATAGAAGATGTCCCAGAGGACGAAAAGAAAATAGTAAAGAAGATGATCATAGTCGCACTTTGGTGTATACAATTGACACCAGATGATCGCCCCTCAATGAGCAAAGTAGTGGAGATGCTCGAAGGAGATGTAGAAAGCCTTGAAATGCCTCTGAAGCCAACCCTTTATCCACATGAAACGGCTGTAGACAATCAAAGAACCAACCTTGACCAAACAACGTCCAGTGATTACGGTAGTTCTTATGATTCTGTTGAAATGGAAACCAAATCTCTATTAGAGAATATTGCTTGA 2121 0.3725 MTLILLLPFTLLIHQVTCWSIATISPIEQEHTCPPSSCGKISNITYPFRLNNDPINCGDKRYELACENNVTTLNLYSGKYHVQSINYNNFTIRLVDLGVQQSNCSSIPLYSLSQSNFCDTYNYYGRNCKDPYHAVSDQERLLYPDMGSHELLFKHIVYLNCTHQVTNNPKYVNTSSCFQFGYSKSNYIYAMAGDLIAQDFQVGCHVKLVTPTSLLGLERNKLLSYDIIHKALVYGFEISWMHLSCHNRCGDLAICLFINSTSDILQCRPYCGSSWDYMAGSTIRSCDTFIKGLYELIKGSIPEYLGFANFKVGFSIGHYGIPSFCAARFLFGMTLFIALLIYKWKRSHLSTYECIEIYLQQQNNLMPIRYSYKEIKKMARGFKDKLGEGGFGTVFKGNLRSGPCVAIKMLGKSKGNGKDFISEVSTIGRIYHLNVVRLLGFCIEGSKRALVYEFMPNGSLDKFIFSKEGSVNISYSQIFDISVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFTPKVSDFGLAKLYPVENSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNLNVQAEHSSQLYFPLWIYDQFGQEGEIEIEDVPEDEKKIVKKMIIVALWCIQLTPDDRPSMSKVVEMLEGDVESLEMPLKPTLYPHETAVDNQRTNLDQTTSSDYGSSYDSVEMETKSLLENIA* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0804 706 Pfam Protein kinase domain 383 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0804 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Mtr1g0804 706 MobiDBLite consensus disorder prediction 670 693 - -
Mtr1g0804 706 ProSiteProfiles Protein kinase domain profile. 380 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0804 706 Coils Coil 691 706 - -
Mtr1g0804 706 Gene3D Transferase(Phosphotransferase) domain 1 455 660 - -
Mtr1g0804 706 SUPERFAMILY Protein kinase-like (PK-like) 361 651 IPR011009 -
Mtr1g0804 706 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Mtr1g0804 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 680 IPR045874 GO:0004672
Mtr1g0804 706 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 680 - -
Mtr1g0804 706 SMART serkin_6 380 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0804 706 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Mtr1g0804 706 Gene3D Phosphorylase Kinase; domain 1 356 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0804 Mtr-Chr1 9073444 9081859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0804 28 666 Receptor kinase-like Gene Family AT5G38260 34.551 5.92e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0804 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0804 - - gmx:100305367 854.744