Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0803 ATGTCTTTGATGGCAGAGTGTCATTCGATATTAATCATTTTCTTTCTCTTGCTTATCAAAAGTAGCACTGCTAATGATCACTGCGTGGAAGCATCTTGTGGACATAACCAACCTCTTATTAGATTCCCTTTTCAACTTGTCAAAGGTACACAAGATCGATGTGTTAATCCAGATTTTTGCCTATATTGTAATGAAAATAAGAAAACAATGTTTTTCCTCCCAACAACTTGGGGTCCAATGGAATTCCTTGTGGTTGAAATATACTACAAATTAGAATGGATTCTTGTTATTGACCCTGAATATTGCATCCCAAAGAAGTTCTTGAAAATTCACAATTCATCATTTTTACCATACCGATTTCATTCAGAATCCCAAACTACCATAGCATTCTTTAACTGCTCTTCTGTTGGGAAACAACACCTGAGAAACCAAGATCAGTCATTCCAAAAGTTACAAAATATGATTACCTGTCCAATTTACATTTCAAGGTCCTCTGACAGTGTTCTTACGTGGGATCTTGCATCATGTACCAAGATGCTCGATGTCAACACTCATACTGCGGTAGAAAACTTAAGGAAGAATTGGCTAAGTTTCAGTTGGCAAAAACCAAATTGTTCTGTGTGTGCAGCAAATGGCAAGAAATGTAGATGGAACAACGGAACCGAAGGTGGCACTGAATGTTTTGACTGCGTCAACAAACGGAAAACAATTCATATTCCAAAATCTCTTATTTTTGCAGCAACAGGTTCAATTGTTTTGGGGTTGGTTACCATTATATTTATTAAGATCTATTTATATTTTAGAAAAAAAGAAGAAGATCAAGTTAGAGTTGACAAGTTTTTAGAGGATTATAGAGCACAACAACCTACTAGATTTTCTTTTGCTGATATAAAAAGAATCACAAATGGGTTTAAGGAAAAACTAGGAGAAGGAGCTCACGGAAAAGTATTTAAAGGAAAACTCTCAAATGAGATTCTGGTTGCTGTGAAGATTCTCAACAATACAGAAGGAGACGGGAAAGAGTTCATTAGCGAAGTGGGAATTATGGGAAAAATCCACCACATCAATGTTGTTCGATTGCTTGGCTTCTGTGCAGAGGGAATTCATCGTGTTCTTGTCTACAATTTATTTTCAAAGGGTTCGTTACAAAGTTTCATATTTCCTCCAGATAACGAGGACCACTTCATGGGGTGGGAGATGCTGCAGAAAATTGGTATTGGCATAGCCAGAGGAATTGAGTATCTTCATCAGGGTTGTAGTCATTCAATCCTTCATTTTGACATCAACCCTCACAATGTTTTGCTCGATGACACATTAACTCCAAAAATTTCAGATTTTGGTCTCGCCAAATTATGTTCCATGAATTGTAGTGTAGTGTCCATGACAGCGGCTAGGGGTACCTTGGGATATATGGCACCTGAAGTTCTGTCAAGAAATTTTGGTAATGTGTCTCTTAAATCTGATATTTATAGCTATGGAATGTTGTTGCTAGAAATGGTTGCAGGAAGGAAGAATATAGACATAAGATCATTAGAAACTTTCCATGATTTATTGGAAGGAGACATACATATCCACATTGACGATGAGTGTGATTATAAAATTGCCAAAAAACTTGCAATTGTTGGACTTTGGTGCATTCAGTGGCACCCCGGAAATCGTCCATCCATCAAATCTGTCATCCAAATGTTGGAGACTGGAGAAGACAACCAATTAACTGTGCCTCCTAATCCTTTTCACCCGACGACTTCCATTACCACTAGTGAAAGCCATTTTCCAAGACAAATTTTCCAAATGGAAGTGATTCAAGAATAA 1812 0.3725 MSLMAECHSILIIFFLLLIKSSTANDHCVEASCGHNQPLIRFPFQLVKGTQDRCVNPDFCLYCNENKKTMFFLPTTWGPMEFLVVEIYYKLEWILVIDPEYCIPKKFLKIHNSSFLPYRFHSESQTTIAFFNCSSVGKQHLRNQDQSFQKLQNMITCPIYISRSSDSVLTWDLASCTKMLDVNTHTAVENLRKNWLSFSWQKPNCSVCAANGKKCRWNNGTEGGTECFDCVNKRKTIHIPKSLIFAATGSIVLGLVTIIFIKIYLYFRKKEEDQVRVDKFLEDYRAQQPTRFSFADIKRITNGFKEKLGEGAHGKVFKGKLSNEILVAVKILNNTEGDGKEFISEVGIMGKIHHINVVRLLGFCAEGIHRVLVYNLFSKGSLQSFIFPPDNEDHFMGWEMLQKIGIGIARGIEYLHQGCSHSILHFDINPHNVLLDDTLTPKISDFGLAKLCSMNCSVVSMTAARGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVAGRKNIDIRSLETFHDLLEGDIHIHIDDECDYKIAKKLAIVGLWCIQWHPGNRPSIKSVIQMLETGEDNQLTVPPNPFHPTTSITTSESHFPRQIFQMEVIQE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0803 603 Pfam Wall-associated receptor kinase galacturonan-binding 28 92 IPR025287 GO:0030247
Mtr1g0803 603 SUPERFAMILY Protein kinase-like (PK-like) 284 564 IPR011009 -
Mtr1g0803 603 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Mtr1g0803 603 Gene3D Phosphorylase Kinase; domain 1 275 376 - -
Mtr1g0803 603 ProSiteProfiles Protein kinase domain profile. 302 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0803 603 Pfam Protein tyrosine and serine/threonine kinase 304 563 IPR001245 GO:0004672|GO:0006468
Mtr1g0803 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 603 IPR045874 GO:0004672
Mtr1g0803 603 PANTHER RECEPTOR-LIKE KINASE 16 603 - -
Mtr1g0803 603 Gene3D Transferase(Phosphotransferase) domain 1 377 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0803 Mtr-Chr1 9052598 9054787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0803 9 577 Receptor kinase-like Gene Family AT5G38260 32.300 6.76e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0803 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0803 - - gmx:100790964 780.785