Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0801 ATGTGCAGAGAAAAATCATTCTTATTCTTAATCCAAATTATGGTAGTAGTGCTACTACTGCATCATCATCATCAAACATGTGATGCAATTACAAATACTAGTAACCAAACATATTGTCCACCTTCTTCATGTGGCAAAATTGGAAACATATCACATCCTTTTCGACTTAAGGATGACCCAACATCATGTGGTGATCCGAGGTACGAGTTATCCTGCGAAAACAACATCACAACCTTAACTTTGTTGTCGGGTAAATACTATGTGAAATCAATCAACTACAATAACTACACAATTCGGTTAGTTGATCCCGGAATTGAAGAGGGTGATTGCTCCACCATTCCTCACTATTACTTGTACAATTATAATTTCAGCAGCTCTTATATCTACGATTCTGTTGATCCATATCAAACTTACCAGAGTAGAATAGTTGATACTACTAGATATAAATATTCACCAGCTCTTACTTTGGCATCATTACAAATGTTCCAGCACGTAATTTACATGAATTGTAGCAGTCCTGTGAGGGATGATCCGGTGTATGCAGATGCAGCTTCTTGCGTGAACAAGTCGAATTCTCAACGTGGCCATGTTTATGCCATTGCCGGGGATTTGAAGGTTAGAAACTATAAAAATGATGACTGTCACGTGGGGGTTGTTACGCCAATATCTTTTTTCCGTTATAATTACAGCTCTGAGGAGTGGAATACTCCCGATGGAAAGTTTTCGTACAGTGACGCGGATTATAGAAATGAACGGATTCCGAATCAAATGTTTGATTACAGTGAAATTCATAGCATGTTGGTGGGTGGATTTGAAGTTTCTTGGATGAGTGGTCCTTGTGAAGATCATTGTGGAATCCCAGATTGCTATTTGAGAGAAACCACTTGGAGTCTTGAATGCGACAATCCGTCTATGCTATGTAGAACAACGCTGGGTTTTCATGTCGGTTGTGTCACTGGAACTCCATCCAAGCTGCGAATGTTTGTTGAAGGTATTTTGTACGGAATTGCCAGAGGACTACCACATCCAATAGGTGTGAGAATACACGATAGAGCTCAGTATGTGTCTGAATCTAAATTTGGTATTGACATAGGAATAACAATTGGAAGGTATATTTTGCCATCATACATTATGGTTAGATTTATGTTGGGTCTCATAGCTCTCTTTGGAAAACTCATGCATACGTATCGATCAAGGCATACATCAATGTATGAAATCATCGAAGATTTTCTTCAAGGGAATTCACTCATGCCAATTAGGTATTCATACAAAGAGATAAAGCAGATGACGAGAGGCTTTAAGGAAAAGTTGGGTGAAGGAGGATATGGTAAGGTTTATAAGGGGAAGCTTCGTAGTGGGCCTTTGGTAGCCATAAAAGTGTTGGGTAAACTTAAGGGAGATAGACATGGACAAGATTTCATTAATGAAGTTGCAACCATAGGAAAAATACATCACACCAATGTGGTGCGACTTGTTGGATTTTGCATTGAGGGATCAAAACGTGCTCTTGTTTATGATTTCATGCCCAATGGCTCTCTTGATAGATATATTTCCTCTAGGGAAGATCATATTTCCTTAACTTATAAGCAAATGTATGAGATATCTCTTGGAGTTGCACGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCTCATAACATTCTTCTTGACAAAGACTTCATCGCCAAGGTTTCAGACTTTGGTCTTGCAAAACTTTATCCTGTTGACAATAGCATTGTAACTTTGACGGCTGCAAGAGGAACAATTGGTTACATGGCTCCGGAATTATTCTACAAAAATATTGGTAAAGTTTCCTATAAGGCCGATGTGTATAGCTTTGGAATGCTCTTAATGGAAATAGCAAACAGGAGAAGAAATTTGAACTCAAATGCAGATGATTCAAGCCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATTGAAGAAAGAGAGATAGATATATCTGGAGAAGCTACCGATGAGGAAAAGAAAAATGTGAAGAAGATGTTCATAATTGCTCTGTGGTGTATACAATTGAACCCTATTGATCGTCCTTCAATGGACAGAGTAATAGAAATGCTTGAAGGAGATATTGAAGATATTGAAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGACAATGGAGTTAGCTCAAATGAATCTTTTTCGGATGATGATGTCACCGGTTCAATTAGTTTTCTTGAGGAAACCGTTGAAGATCCTTTACTATAG 2274 0.3782 MCREKSFLFLIQIMVVVLLLHHHHQTCDAITNTSNQTYCPPSSCGKIGNISHPFRLKDDPTSCGDPRYELSCENNITTLTLLSGKYYVKSINYNNYTIRLVDPGIEEGDCSTIPHYYLYNYNFSSSYIYDSVDPYQTYQSRIVDTTRYKYSPALTLASLQMFQHVIYMNCSSPVRDDPVYADAASCVNKSNSQRGHVYAIAGDLKVRNYKNDDCHVGVVTPISFFRYNYSSEEWNTPDGKFSYSDADYRNERIPNQMFDYSEIHSMLVGGFEVSWMSGPCEDHCGIPDCYLRETTWSLECDNPSMLCRTTLGFHVGCVTGTPSKLRMFVEGILYGIARGLPHPIGVRIHDRAQYVSESKFGIDIGITIGRYILPSYIMVRFMLGLIALFGKLMHTYRSRHTSMYEIIEDFLQGNSLMPIRYSYKEIKQMTRGFKEKLGEGGYGKVYKGKLRSGPLVAIKVLGKLKGDRHGQDFINEVATIGKIHHTNVVRLVGFCIEGSKRALVYDFMPNGSLDRYISSREDHISLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDKDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNADDSSQIFFPYWIYNELIEEREIDISGEATDEEKKNVKKMFIIALWCIQLNPIDRPSMDRVIEMLEGDIEDIEIPPKPSPYPTEIIQDNGVSSNESFSDDDVTGSISFLEETVEDPLL* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0801 757 MobiDBLite consensus disorder prediction 724 743 - -
Mtr1g0801 757 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 730 - -
Mtr1g0801 757 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Mtr1g0801 757 Gene3D Transferase(Phosphotransferase) domain 1 508 712 - -
Mtr1g0801 757 Gene3D Phosphorylase Kinase; domain 1 410 507 - -
Mtr1g0801 757 Pfam Protein kinase domain 434 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0801 757 ProSiteProfiles Protein kinase domain profile. 431 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0801 757 SUPERFAMILY Protein kinase-like (PK-like) 421 731 IPR011009 -
Mtr1g0801 757 MobiDBLite consensus disorder prediction 713 743 - -
Mtr1g0801 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Mtr1g0801 757 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Mtr1g0801 757 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 730 IPR045874 GO:0004672
Mtr1g0801 757 SMART serkin_6 431 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0801 757 CDD STKc_IRAK 437 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0801 Mtr-Chr1 9029821 9034522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0801 359 718 Receptor kinase-like Gene Family AT5G38260 44.628 2.62e-97 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0801 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0801 - - mtr:MTR_1g027050 1332.39