Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0800 ATGATTCCCTTCAACATGTCACTCACAATGTTAGCATTGCTACTGCTGATATCAATGAACCTTGTCAATGGTCAGAACAATGATAACTCGTCCGATGAATGCCCCTTTCGTTTATCTTGTTCGCATAACAAGAATCAAATCATTGAGTTTCCAGCAGATCCAGTTCCAGTAAAGCTCCTCGTTACAGACATAGATTGTCAATCTCAACAATTATACCTATCTCACCCACAAAATTGTCTTTCTAGTATCTTTGTAACACACAATTTTTCACTATTTTATCCTTTTAGCCTTGCTTCATTATTTAATCGTCCTAGCAGCGTCAACAACGTTACTTTCTTTAATTGCTCTTCAGTTGGACAACATCTCAGAAGCTGGGAACAAACAAAACCCGGTGCCCAAGACATGTTATCTTGTCCAATTTATGTTGCTGATTTATCTGAAAGTGTCATCGAATTGGACTTATTACGTTGCACCAGAATGTTTGATAAAGTTTTGCCAATAGATTTAAGTTTTAGAAATAACTATCTCAAATTGAATTGGTCAGAACAAACTTTTCATAGTCAATGTTTACAACCACAGATTAAATCAAAGCACACATCCATTATTGCTGCAACAACAGGGGCAATTGTTGGTTCAACTATTCTGGTTGTTTTGTTTGGTGTTTTCTTTCGAGTATACCTCTATTATAGGATGAAAGGAGAAGATCAAACTAGACTTGAAAACTTTTTGAAGGATTATGAAGCGTCAAAGCCAACTAGATTTTCTTATGCCGATATCAAGAGAATTACTGATCAATTCAAGGAAAAGCTGGGCGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCGAGTCAAATTCTTGTTGCTGTGAAGATGCTTAATAATACAGAAGGAGATGGGAGAGAGTTCATAAATGAAGTAGGAACTATGGGAAAAATCCATCATGTTAATGTTGTCCGGTTACTTGGCTTTTGCGCTGATGGATTTTATCGTGCTTTGGTTTATGACTTTTTCCCTAATGGTTCGTTGCAAAATTTCATTTCTTCACCTGACAACAAGGATGTTTTCCTTGGTTGGGACTTATTGCAACAGATTGCTCTAGGCATTGCCAATGGAATTGAGTATCTTCACCAGGGCTGTGATCAAAGAATTCTTCATTTTGATATCAATCCGCACAATATCTTGTTAGATGACAATTTTACTCCAAAAATATCAGACTTTGGTTTAGCCAAGTTGTGCTCCAAAAATCAAACTATTGTATCGATGACTGCGGCTAGGGGAACATTAGGATACATGGCACCTGAAGTATTTTCTCGAAACTTTGGGAATGTCTCTTATAAATCTGATATATACAGCTATGGAATGTTGCTGCTGGAGATGGTCGGAGGAAGAAAGAATACTAAGACAGTCACAGATGAAGAAAATTTTCAAGTTTTGTATCCAGATTGGATCCACGGTTTGTTTGAAGGGGGAGATATACATATCCCTATTGATGAAGATGGAGATTATAGAATTGCAAAGAAACTAGCAATTGTCGGACTTTGGTGCATTCAGTGGCATTCAGTGCATCGACCAGCCATGAAAATGGTGGTGCAGATGCTACATGGAGAGTTAGACAAGTTAAAAGTTCCCACCAATCCTTTCAATGATTCATCTTCAACTAACGGAACCGCATATACAGCTACAGAATATTTCAATTCAGAACTAGATGTGATTCAAGAACTGGAATAG 1734 0.3737 MIPFNMSLTMLALLLLISMNLVNGQNNDNSSDECPFRLSCSHNKNQIIEFPADPVPVKLLVTDIDCQSQQLYLSHPQNCLSSIFVTHNFSLFYPFSLASLFNRPSSVNNVTFFNCSSVGQHLRSWEQTKPGAQDMLSCPIYVADLSESVIELDLLRCTRMFDKVLPIDLSFRNNYLKLNWSEQTFHSQCLQPQIKSKHTSIIAATTGAIVGSTILVVLFGVFFRVYLYYRMKGEDQTRLENFLKDYEASKPTRFSYADIKRITDQFKEKLGEGAHGAVYKGKLSSQILVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISSPDNKDVFLGWDLLQQIALGIANGIEYLHQGCDQRILHFDINPHNILLDDNFTPKISDFGLAKLCSKNQTIVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTVTDEENFQVLYPDWIHGLFEGGDIHIPIDEDGDYRIAKKLAIVGLWCIQWHSVHRPAMKMVVQMLHGELDKLKVPTNPFNDSSSTNGTAYTATEYFNSELDVIQELE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0800 577 ProSiteProfiles Protein kinase domain profile. 264 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0800 577 Gene3D Phosphorylase Kinase; domain 1 238 338 - -
Mtr1g0800 577 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 577 IPR045874 GO:0004672
Mtr1g0800 577 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Mtr1g0800 577 Pfam Protein tyrosine and serine/threonine kinase 266 479 IPR001245 GO:0004672|GO:0006468
Mtr1g0800 577 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 577 - -
Mtr1g0800 577 Gene3D Transferase(Phosphotransferase) domain 1 339 555 - -
Mtr1g0800 577 SUPERFAMILY Protein kinase-like (PK-like) 245 535 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0800 Mtr-Chr1 9021417 9037501 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0800 185 548 Receptor kinase-like Gene Family AT1G66910 44.882 4.01e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0800 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0800 - - adu:110273083 663.685