Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0799 ATGTGCAGAGCAAACTCATTCTTATGTTTCCTCCAAATTATGGTTGTTGCTATGCTACTGCATCATCATCAAACATGTGATGCAACAAATAGTAATATTAATAAAACTTGTCCCCCTTCTTCATGTGGCAAAATCAGCAACATAAAGTATCCCTTCCGACTTAAGAATGATCCAGCAACCTGCGGTGATCCGAGGTACGAGTTATCCTGCGAAAAAAACATCACAATGTTAAAGCTGCTTTCTGGTAAATACCATGTAAAATCAATCAACTACAATAACTACACAATTCGGTTAGTTGATCCTGGAATAAAAGAAGGTGATTGCTCTTCAATTCCCCGGAATTTCCTAACCTCATCAAATTTCACAAGTTCTTACAATTATACTTACTACGAGGATCCATATCAAAATTTCCAGTACAGAATACCTTCTGGAACATTACGACTATTCCAGCACGTAGTTTACATGAATTGCAGCAATCCTATACTGGATGATCCAGCGTACGTGGATGCAGATTCTTGCATCAAGTCCAATTCCCAAGGTGGCCATGTTTATACCATTGCTGGAGATTTGAAGGTTGAAAACATAAAACATGATTGCCATGTGGCGGCTGTTACCGCGATATCTTTTCTCGGTTATGATTATAGTTCGTATAAACGGGACATTTTCTATCAGAAGTTTTCGTATAATGAAATTCATACGATGTTGTTGGGTGGATTTGAGGTTGCATGGATGAGTGGTCCTTGTGAAGATCTTTGTAGAGAACCACCTTGCTATTTGAGGGAAACCACTTGGAGTCTTAGATGCAGCGATCATGGTGATTACTGTATAACCACAATGGGATTTCATGTTGATTGTGGATCTCCGTCAAAGCTGCGAATGTTTGTCGAAGGTATTATGTATGGCATTGCCAGAGGATTCATGCAAGCATTTGGTGCGACGATATACAATGGATCAAGGGGTATTTCTCAATCTAAACTTGGTATTGACATAGGAACAACCATTGGAAAATATGTTTTGGCCCCGTACATTTTAGTGAGACTTATGTTGGGTCTTGTAGTTTTCTTTGCAAAATTGATACATAAATATCGAATAAGGCATACATCAATGTATGAAAACATCGAAGATTTTCTTCAAGGGAACTCCCTCATGCCAATTAGGTATTCATACACAGAGATAAAGAAAATGACTAATGGTTTTAAGGACAAGTTGGGTGAAGGAGGCTATGGTAAGGTTTATAAGGGAAAGCTACGCAGTGGGCCATCGGTAGCCATAAAGATGTTGGGTAAACACAAGGGTAAGGGAAATGGGCAAGATTTCATCAATGAAGTTGCAACAATAGGAAGAATACATCACACCAATGTGGTGCGACTTATTGGATTTTGTGTTGAGGGATCAAAAAGAGCTCTTGTTTATGATTTCATGCCCAATGGCTCTCTTGATAAATATATATCATCTAGAGAAGATCATATTTCCTTAACTTATAAACAAATATATGAGATATCTCTTGCCGTTGCACGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCTCATAACATACTTCTTGACCAGGACTTCATTGCAAAGGTTTCAGATTTTGGTCTTGCAAAACTTTATCCTATTGAAAATAGCATTGTAACTATGACCGCTGCTAGAGGTACAATTGGTTACATGGCACCAGAATTGTTCTACAAAAATATTGGTAAAGTTTCCTATAAAGCCGATGTGTATAGCTTTGGAATGCTCTTAATGGAAATAGCAAACAGGAGAAGAAATTTAAACTCAAATGCAGATGATTCAAGCCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGGTTGAAGAAAGGGAGATAGAAATATTGGGAGAAGTTACGGATGAGGAAAAAAAAAATGTGAAGAAAATGTTCATAGTTGCTTTGTGGTGTATACAATTGAAGCCCAATGACCGTCCTTCAATGGACAAAGTAATAGAAATGCTTGAAGTAGATATTAAAGACATTAAAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGATAATGGAGTTAGCTCTAATGAATCATTATCAGATGATGATGTCACCGGCTCAATTAGTTTTCTTGAGGAAACTATGGAGCATCCTTTACTATAG 2172 0.3711 MCRANSFLCFLQIMVVAMLLHHHQTCDATNSNINKTCPPSSCGKISNIKYPFRLKNDPATCGDPRYELSCEKNITMLKLLSGKYHVKSINYNNYTIRLVDPGIKEGDCSSIPRNFLTSSNFTSSYNYTYYEDPYQNFQYRIPSGTLRLFQHVVYMNCSNPILDDPAYVDADSCIKSNSQGGHVYTIAGDLKVENIKHDCHVAAVTAISFLGYDYSSYKRDIFYQKFSYNEIHTMLLGGFEVAWMSGPCEDLCREPPCYLRETTWSLRCSDHGDYCITTMGFHVDCGSPSKLRMFVEGIMYGIARGFMQAFGATIYNGSRGISQSKLGIDIGTTIGKYVLAPYILVRLMLGLVVFFAKLIHKYRIRHTSMYENIEDFLQGNSLMPIRYSYTEIKKMTNGFKDKLGEGGYGKVYKGKLRSGPSVAIKMLGKHKGKGNGQDFINEVATIGRIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDKYISSREDHISLTYKQIYEISLAVARGIAYLHQGCDMQILHFDIKPHNILLDQDFIAKVSDFGLAKLYPIENSIVTMTAARGTIGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNADDSSQIFFPYWIYNELVEEREIEILGEVTDEEKKNVKKMFIVALWCIQLKPNDRPSMDKVIEMLEVDIKDIKIPPKPSPYPTEIIQDNGVSSNESLSDDDVTGSISFLEETMEHPLL* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0799 723 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Mtr1g0799 723 ProSiteProfiles Protein kinase domain profile. 397 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0799 723 SUPERFAMILY Protein kinase-like (PK-like) 382 671 IPR011009 -
Mtr1g0799 723 Pfam Protein kinase domain 400 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0799 723 MobiDBLite consensus disorder prediction 690 705 - -
Mtr1g0799 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Mtr1g0799 723 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 696 IPR045874 GO:0004672
Mtr1g0799 723 SMART serkin_6 397 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0799 723 MobiDBLite consensus disorder prediction 681 705 - -
Mtr1g0799 723 Gene3D Phosphorylase Kinase; domain 1 374 473 - -
Mtr1g0799 723 Gene3D Transferase(Phosphotransferase) domain 1 474 682 - -
Mtr1g0799 723 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 11 696 - -
Mtr1g0799 723 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0799 Mtr-Chr1 9015553 9020510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0799 25 684 Receptor kinase-like Gene Family AT5G38260 33.482 7.60e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0799 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0799 - - mtr:MTR_1g027050 1097.42