Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0798 ATGTTCCATTTTATACGAATGCAAAGTGAAAACCAGTTTTCACCATCAATCATGTGCAAAGAAAAATCATTCTTATTCTTAATCCAAATTATGGTAGGAGTGCTACTACTGCATCATCATCAAACATGTGATGCAATTACAAATACTAGTAACCAAACATTCTGTCCACCTTCTTCATGCGGCAAAATCACAAACATAACACATCCATTTCGACTTAAGGATGATCCAACATCATGTGGTGATCCAAGGTATGAGTTATCCTGCGAAAACAACATCACAATGTTAACTCTGTTGTCGGGTAAATACTATGTGAAATCAATCAACTACAATAACTACACAATTCGGTTAGTTGATCCCGGAATTGAAGAGGGTGATTGCTCCACCATTCCTCACTATTACTTATACAATTATAATTTCAGCAGCTCTTATATCTACGATTCTGTTGATCCATATCAAACTTACCAGAGAAGAATAGTTGATACTACTATATATGAAAATGCAGAAGCTCTTACTTTGGAAATTCTTAAATATCCTACAACATTACAAATGTTCCAGCACGTAATTTACATGAATTGTAGCAGTCCTGTGAGGGATGATCCGGTGTATGCGGATGCAGCTGCTTGCATGAACAAGTCGAATTCTCAAGGTGGCCATGTTTATGCTATTGCCGGGGATTTGAAGGTTAGAGACTATAAAGATGATGACTGTCACGTGGAGGTTGTTACGCCGATATCCTTTTTCCGTTATAATTATAGCTCTAAGGAGTGGAATACTCCCGATGGAAAGTTTTCGTACATGGACAAAAGTTACCCAAGTTATTATAAAAATAAATGGAAGGTTCCGAATCAAATGTTTGATTACAGTGAAATTCATAGGATGTTGGTGAGTGGTTTTGAAGTTTCTTGGATGACTGGTGCTTGTGAAGATCATTGCGGAGTCCGAGATTGCTATTTGAGAGAAACCACTTGGAGCCTTGAATGCAATGATCCGTCAAGCCCATGTATAACAACATTGGGATTTCACGTCGGTTGTCCACCTTACCTATTTGGAGATTTAGGACCTCCATCGAAGCTGCGAATGTTTGTCGAAGGTATTATGTACGGAATTGCCAGAGGACTAACACATGCAATAGGTGTGAAAATATACGATGGAGCTCAGGGTGTTTCTGAATCTAAGATTGGTATTGACATAGGAAAAATAATTGGAAGGTATATCTTGTCATCATATATTTTGATTAGATTTATGTTGGGTCTCATAGCTCTCTTTGGAAAACTCATACATACATATCGTTCAAGGCATACATCAATGTATGAAAACATCGAAGATTTTCTTCAAGGAAATTCCCTCATGCCAATTAGGTATTCATACAAAGAGATAAAACAGATGACTAGAAGCTTTAAGGAAAAGTTGGGTGAAGGAGGATATGGTAAGGTTTATAAGGGAAAGCTTCGTAGTGGGCCTTTGGTAGCCATAAAGATGTTGGGCAAACTTAAGGGTAATGGAAATGGACAAGATTTCATTAGTGAAGTTGCAACTATAGGAAAAATACATCACACCAATGTGGTGCGACTTGTTGGATTTTGTGTTGAGAAATCAAAACGTGCTCTTGTTTATGATTTCATGCCCAATGGCTCTCTTGATAGATATATTTCCTCTAGAGAAGACCATATTTCCTTAACTTATAAGCAAATGTACGAGATATCTCTTGGAGTTGCACGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTCGATATCAAGCCTCATAACATACTTCTTGACCAGGACTTCATCGCCAAAGTATCAGACTTTGGTCTTGCAAAACTTTATCCAGTTGACAATAGCATTGTAACTTTGACTGCTGCAAGAGGAACAATTGGTTACATGGCACCAGAATTGTTCTACAAAAATATTGGTAAAGTTTCCTATAAGGCCGATGTGTATAGCTTTGGAATGCTCTTAATGGAAATAGCAAACAGGAGAAGAAATTTGAACTCAAATGCAGATGATTCAAGCCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATGGAAGAAAGGGAGATAGATATATCTGGAGAAGCTACCGATGAGGAAAAGAAAAATGTGAAGAAGATGTTCATAATTGCTCTGTGGTGTATACAATTGAACCCTATTGATCGTCCTTCAATGGACAGAGTAATAGAAATGCTTGAAGGAGATATTGAAGACATTGAAATTCCTCCAAAGCCTTCTCCATATCCAACTGAAATTATTCAAGATAATGGAGTTAGCTCTACTGAATCTTTATGGGATGATGATGTCACCGGTTCAATTAGTTTTATTGAAGAAACCGTAGAAGATCCTTTACTATAA 2373 0.3704 MFHFIRMQSENQFSPSIMCKEKSFLFLIQIMVGVLLLHHHQTCDAITNTSNQTFCPPSSCGKITNITHPFRLKDDPTSCGDPRYELSCENNITMLTLLSGKYYVKSINYNNYTIRLVDPGIEEGDCSTIPHYYLYNYNFSSSYIYDSVDPYQTYQRRIVDTTIYENAEALTLEILKYPTTLQMFQHVIYMNCSSPVRDDPVYADAAACMNKSNSQGGHVYAIAGDLKVRDYKDDDCHVEVVTPISFFRYNYSSKEWNTPDGKFSYMDKSYPSYYKNKWKVPNQMFDYSEIHRMLVSGFEVSWMTGACEDHCGVRDCYLRETTWSLECNDPSSPCITTLGFHVGCPPYLFGDLGPPSKLRMFVEGIMYGIARGLTHAIGVKIYDGAQGVSESKIGIDIGKIIGRYILSSYILIRFMLGLIALFGKLIHTYRSRHTSMYENIEDFLQGNSLMPIRYSYKEIKQMTRSFKEKLGEGGYGKVYKGKLRSGPLVAIKMLGKLKGNGNGQDFISEVATIGKIHHTNVVRLVGFCVEKSKRALVYDFMPNGSLDRYISSREDHISLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDQDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNADDSSQIFFPYWIYNELMEEREIDISGEATDEEKKNVKKMFIIALWCIQLNPIDRPSMDRVIEMLEGDIEDIEIPPKPSPYPTEIIQDNGVSSTESLWDDDVTGSISFIEETVEDPLL* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0798 790 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 279 763 - -
Mtr1g0798 790 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 24 240 - -
Mtr1g0798 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Mtr1g0798 790 SUPERFAMILY Protein kinase-like (PK-like) 454 764 IPR011009 -
Mtr1g0798 790 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Mtr1g0798 790 Gene3D Transferase(Phosphotransferase) domain 1 541 745 - -
Mtr1g0798 790 SMART serkin_6 464 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0798 790 CDD STKc_IRAK 470 739 - -
Mtr1g0798 790 ProSiteProfiles Protein kinase domain profile. 464 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0798 790 Pfam Wall-associated receptor kinase galacturonan-binding 55 118 IPR025287 GO:0030247
Mtr1g0798 790 Gene3D Phosphorylase Kinase; domain 1 441 540 - -
Mtr1g0798 790 Pfam Protein kinase domain 466 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0798 790 PANTHER RUST RESISTANCE KINASE LR10-RELATED 279 763 IPR045874 GO:0004672
Mtr1g0798 790 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 240 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0798 Mtr-Chr1 9005675 9011022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0798 453 760 Receptor kinase-like Gene Family AT5G38280 47.923 2.31e-97 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0798 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0798 - - mtr:MTR_1g027050 1520.75