Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0797 ATGTCACTCACAATATTAGCATTGCTTCTGCTGCTATCAATGAACCTTGTAAATGGTCAGAACAATAATAACTCGTCCGTTGAATGCCCCTTTCGTTTATCTTGTTCAAGCAACAAGCAACAATACCTTGAGTTTCCCTCAAAACCTGTATCAAAAAAATTCCTTATCAGAGACATAGATTGCAAATTGAAACACTTAGTCCTATCTGACCCACAAAACTGTCTTCCTAGTCTCTTTTTAACAAACAATTTTTCATTATTTTATCCTTTTCAATCAGATTTTTCCTACAACAACATTACTTTCTTTAATTGCTCTTCAGTTGGAGTACACCATCTGAAAAGCTGGGACCAAAGAAACCCTGATGTTCAAGACATGCTGTCTTGTCCGATTTATGCTACCGATTCTACTGAAAGTGTCGTCGAATTGGACTTATTAAGCTGCACAAGAATGTTCAATAAAGTTTTGCCAGTAACAGCAAGTTATTATATAAGGTATAATGCGCTCAGCTTGAGTTGGTCAGAAACAGCTTTTCCTAGTCAATGTTTAGAATATGATCAGATACACAACAAATCAAAGAAGAACCTCACATCCATTATTTTAGTAACAACAGGAGCAATTGTTGGTTCAACTATGCTGGTTGTTTTGATTGGTGTTTTTATTCGAGTTTATGTCCATTTTAGGACGAAAGGGGAAGATCAAATGAGACTTGAAAACTTTTTGAAGGATTATGAAGCGTCAAAGCCAACTAGATTTTCTTATGCAGATATCAAGAGAATTACGGATCAGTTCAAAGAAAAGCTAGGCGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAATCAAATTATGGTTGCTGTGAAGATGCTTAGTAATACAGAGGGAGATGGGAGTGAGTTCATAAATGAGGTGGGAACTATGGGAAAAATCCATCATGTTAATGTTGTTCGGTTGCTTGGCTTTTGTGCCGATGGATTTTATCGTGCTCTGGTTTATGACTTTTTCCCGAATGGTTCGTTGCAAAACTTCATTTCTTCACCCGACAACAAGGATGTTTTCCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGGCATTGCCAATGGGATTGAGTATCTTCACCAAGGTTGTGATCATAGAATTCTTCACTTTGATATCAATCCCCACAATGTCTTGTTAGATGACAATTTCATTCCAAAAATATCGGACTTCGGTTTAGCGAAGCTGTGCTCTAAAAATCATAGCACTGTATCGATGACTGCAGCCAGGGGAACATTAGGTTACATGGCACCTGAAGTTTTTTCTCGAAACTTTGGGAATGTCTCTTATAAGTCTGATATATACAGCTACGGTATGTTGTTGCTAGAGATGGTTGGAGGAAGAAAGAATACTAAAACAACTACTGGTGGCGAAGAAAATTTCCAAGTTCTGTATCCAGATTGGATCCATGGTTTACTTGAAGGTGGAGACGTATATATCCCAATTGATGAAGAGGGAGATTGTAGAATTGCAAAAAAACTAGCAATTGTCGGACTTTGGTGCATTCAGTGGCACTCCGTGCATCGGCCGTCCATGAAAACTGTGGTGCAGATGCTTCAAGGAGAGGGAGACAAATTAAAAGTTCCCACCAATCCTTTCAATGCTTCAGTATCAACTAATAGAACTGTAAATACTGTTCCAGGATGTCTGAATGTAGAACTAGATGTCATTCAAGAATTAGACTAG 1728 0.3808 MSLTILALLLLLSMNLVNGQNNNNSSVECPFRLSCSSNKQQYLEFPSKPVSKKFLIRDIDCKLKHLVLSDPQNCLPSLFLTNNFSLFYPFQSDFSYNNITFFNCSSVGVHHLKSWDQRNPDVQDMLSCPIYATDSTESVVELDLLSCTRMFNKVLPVTASYYIRYNALSLSWSETAFPSQCLEYDQIHNKSKKNLTSIILVTTGAIVGSTMLVVLIGVFIRVYVHFRTKGEDQMRLENFLKDYEASKPTRFSYADIKRITDQFKEKLGEGAHGAVYKGKLSNQIMVAVKMLSNTEGDGSEFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISSPDNKDVFLGWDLLQQIALGIANGIEYLHQGCDHRILHFDINPHNVLLDDNFIPKISDFGLAKLCSKNHSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTTGGEENFQVLYPDWIHGLLEGGDVYIPIDEEGDCRIAKKLAIVGLWCIQWHSVHRPSMKTVVQMLQGEGDKLKVPTNPFNASVSTNRTVNTVPGCLNVELDVIQELD* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0797 575 SUPERFAMILY Protein kinase-like (PK-like) 244 533 IPR011009 -
Mtr1g0797 575 ProSiteProfiles Protein kinase domain profile. 261 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0797 575 Pfam Protein tyrosine and serine/threonine kinase 263 466 IPR001245 GO:0004672|GO:0006468
Mtr1g0797 575 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Mtr1g0797 575 Gene3D Transferase(Phosphotransferase) domain 1 336 548 - -
Mtr1g0797 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 574 IPR045874 GO:0004672
Mtr1g0797 575 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 574 - -
Mtr1g0797 575 Gene3D Phosphorylase Kinase; domain 1 236 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0797 Mtr-Chr1 9000007 9002087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0797 172 553 Receptor kinase-like Gene Family AT1G66910 42.929 1.22e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0797 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0797 - - adu:110273083 662.144