Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0796 ATGTGCAGAGAAAAATCATTCTTATTCTTAATCCAAATTATGGTAGTAGTGCTACTACTTCATCATCATCATCATCAAACATGTGATGCAATTACAAATACTAGTAACCAAACATATTGTCCACCTTCTTCATGTGGCAAAATCAACAACATAAAATATCCGTTTCGACTTAAGAATGATCCAACAACCTGTGGTGATCCGAGGTACGAGTTATCCTGCGAAAACAACATAACAACTTTAACTCTATTGTCGAGTAAATACTATGTGAAATCAATCAACTACAATAACTACACAATCAGAATAGTTGATCCCGGAATTGAAGAGGGTGATTGCTCCTCCTTTCCTCGCTATTACTTATACAATTATAATTTCAGCAGCTCTTATATCTTCGATTCTGTTGATCCATATCAAACATACCAGAGCAGAATAGTTGATACTACTAGATATAAATATTCACCAGCTCTTACTTTGGCATCATTACAAATGTTCCAGCACGTAATTTACATGAATTGTAGCAGTCCTGTGAGGGATGATCCGGTGTATGCAGATGCAGCTTCTTGCGTGAACAAGTCGAATTCTCAACGTGGCCATGTTTATGCCATTGCCGGGGATTTGAAGGTTAGAAACTATAAAAATGATGACTGTCACGTGGGGGTTGTTACGCCAATATCTTTTTTCTGTTATAATTACAGCTCTGAGGATTGGCATACTCCCGATGGAAAGTTTTCGTACGAGGACAGTAGTTTCCCATATGAATGGAAGGTTCCGAATCAAATGTTTGATTACAGTGAAATTCATAGGATGTTGGTGAGTGGTTTTGAAGTTTCTTGGATGAGTGGTCCTTGTGAAGATCTTTGTGGAAAACCAGATTGCTATTTGAGAGAAACCACTTGGAGTCTTGAATGCGATGATCCGTCTAGTCTATGTAGAACAACGCTGGGTTTTCATTACGGTTGTATCACTGGAACTCCATCCAAGCTGCGAATGTTTGTCGAAGGTATTACGTACGGAATTGCCCAAGGACTACTACATGCAATGGGTGTGATAATAGACGGTGGAGCTGAGGGATTTTCTGACTCTAAACTTGGTCTTGACATAGGAAATATCATTGGAAGGTATATTTTGTCATCATACATTATTGTTAGATGTATGATAGGTCTCATAGTTTTCTTTGCAAAATTGATACATACATATCGAGCACGACATACATCAATGTATGAAAACATTGAAGATTTTCTTCAAGGGAATTCCCTCCTACCAATTAGGTATTCATACAAAGAGATAAAGAAGATGACGAGAGGCTTTAACGAAAAGTTGGGTGAAGGAGGATATGGTAAGGTTTATAAGGGAGAGCTTCGTAGTGGGCCTTTGGTAGCCATAAAAGTGTTGGGTAAACTTAAGGCAAATAGAAATGGGCAAGATTTCATTAATGAAGTTGCAACCATAGGAAAAATACATCACGCCAATGTGGTGCGACTTGTTGGATTTTGTGTTGAGGGATCAAAACGTGCTCTTGTTTATGATTTCATGCCAAATGGCTCTCTTGATAGATATATTTCCTCTAGAGAAGATCACATTTCCTTAACTTATAAGCAAATGTACGAGATATCTCTTGGAGTTGCACGTGGAATTGCTTATTTGCATCAAGGCTGTGACATGCAAATTTTACATTTTGACATCAAGCCTCATAACATACTTCTTGACCATGACTTCATCGCCAAAGTTTCAGACTTCGGTCTTGCAAAACTTTATCCAGTTGACAATAGCATTGTAACTTTGACTGCTGCAAGAGGAACAATTGGTTACATGGCACCAGAGTTGTTCTACAAAAATATTGGTAAAGTCTCCTATAAGGCCGATGTATATAGCTTTGGAATGCTCTTGATGGAAATAGCAAACAGGAGAAGAAATTTGAACTCAAATGCAAATGATTCAGACCAAATTTTCTTTCCCTATTGGATCTACAATGAATTGATTGAAGAAAGGGAGATAGAAATATTGGGAGAAGCTACCAATGAGGAAAAGAAAAATGTGAAGAAGATGTTCATAATTGCTATATGGTGTATACAATTGAACCCTATTGATCGTCCTTCAATGTACAGAGTAATAGAAATGCTTGAAGGAGATATTGAAGACATTAAAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGGTGATGGAGTAAGCACTAGTGAATCTTTATGGGATGATGATGTCACTGGCTCAATTAGTTATCTCGAGGAGACTATAGAAGATCCTTTACTATAA 2280 0.3741 MCREKSFLFLIQIMVVVLLLHHHHHQTCDAITNTSNQTYCPPSSCGKINNIKYPFRLKNDPTTCGDPRYELSCENNITTLTLLSSKYYVKSINYNNYTIRIVDPGIEEGDCSSFPRYYLYNYNFSSSYIFDSVDPYQTYQSRIVDTTRYKYSPALTLASLQMFQHVIYMNCSSPVRDDPVYADAASCVNKSNSQRGHVYAIAGDLKVRNYKNDDCHVGVVTPISFFCYNYSSEDWHTPDGKFSYEDSSFPYEWKVPNQMFDYSEIHRMLVSGFEVSWMSGPCEDLCGKPDCYLRETTWSLECDDPSSLCRTTLGFHYGCITGTPSKLRMFVEGITYGIAQGLLHAMGVIIDGGAEGFSDSKLGLDIGNIIGRYILSSYIIVRCMIGLIVFFAKLIHTYRARHTSMYENIEDFLQGNSLLPIRYSYKEIKKMTRGFNEKLGEGGYGKVYKGELRSGPLVAIKVLGKLKANRNGQDFINEVATIGKIHHANVVRLVGFCVEGSKRALVYDFMPNGSLDRYISSREDHISLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDHDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNANDSDQIFFPYWIYNELIEEREIEILGEATNEEKKNVKKMFIIAIWCIQLNPIDRPSMYRVIEMLEGDIEDIKIPPKPSPYPTEIIQGDGVSTSESLWDDDVTGSISYLEETIEDPLL* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0796 759 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Mtr1g0796 759 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 728 - -
Mtr1g0796 759 Gene3D Phosphorylase Kinase; domain 1 413 509 - -
Mtr1g0796 759 ProSitePatterns Protein kinases ATP-binding region signature. 439 461 IPR017441 GO:0005524
Mtr1g0796 759 SMART serkin_6 433 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0796 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Mtr1g0796 759 Pfam Protein kinase domain 436 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0796 759 SUPERFAMILY Protein kinase-like (PK-like) 418 707 IPR011009 -
Mtr1g0796 759 ProSiteProfiles Protein kinase domain profile. 433 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0796 759 Gene3D Transferase(Phosphotransferase) domain 1 510 718 - -
Mtr1g0796 759 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 728 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0796 Mtr-Chr1 8994497 8999439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0796 361 748 Receptor kinase-like Gene Family AT5G38260 43.511 7.14e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0796 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0796 - - mtr:MTR_1g027050 1272.69