Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0794 ATGTGGTGGTGGGTGAGAGTGATATTGGTACTGTTGTTACCATTTTCACTTCTAATTCAACAAGGTAGCAGCAGCACTACAACAAGTGCTTGTCCACCTTCATCTTGTGGTAAAATTTCAAACATAAGTTATCCATTTCGATTAAAAGATGATCCAATTCATTGCGGGGATAGCAGGTATGAACTATCTTGTGAAAATAACGTGACAACCTTAAATTTGTATTCCGGAAAATATTATGTGAAATCCATCAACTACAACAATTTCATAATCCGATTGGTTGATATTGGAATTCAACAAGATAATTGTTCTTCATTTCCTCTCTATTTCTTGACTCAATCTGATTTCTGTGTAAGATACAATTACGTGGACAAATATTGCACAGATCCATACCAAGCCACAGCAGGAGGAGGAGGAGGAGGAGGTTCCAATGCCCATCTTTTTGAGCATATAGTTTACTTGAATTGTACTCATCGAGTGACCAACAATCCTAAATATGTGAATATTTCTTCATGTCTCAATTGGAGCTCTAAATCCCAAGGGTATTATATTTATGCTATGGCTGGTGATTTAATTGCTGATGATTTTCAAGTTGGTTGTCATGTGATGTTGGTTACTCCAACGTCTTGGTTGAGAAACTTGCAAGGAAATGAAGTGGTTTCTTATGATGTTATTCGCAAGGCGTTAGAATATGGATTTGAGATTTCGTGGTTGCGTCATATTTTTCAAGATCGTTGCAAAGGTAGTACGCAATGCTCCTTAAACACTTCAACTGAGACGCTTCAATGCGTTTGCTTTTGCCGGAGTTTCTGGGGAACTTGGAGCGAAACTTGTGGAATACGGTCCCAGCTGAGTTTCTACACTAAAGATACTATCATCACTATCTGGATAGGATTAATTGAAGTAATAAAAGGGCCAAACCTAAAATATGAATATGATACAGAGTATATAATAGGATTACGCACAGGACACTATGTCCTACCGTCCTTCTTTGCAGCTAGATTTCTGTTTGGGATGACATTATTTATTGCCTTGTTGATATACAAATGGAAGAAAAGACATTTATCAATGTTTGATTATATTGAAATATATCTGCAACAAGAAAACAATCTCTTGCCCATTGGATATTCATACAAAGAAATTAAGAAAATGGCTAGAGGTTTCAAAGACAAATTAGGTGAAGGAGGCTTTGGCACTGTGTTTAAGGGAAAACTACGTAGCGGTCCTTGTGTGGCAATCAAGATGTTGGGTAAATCAAAAGGTAACGGGCGAGACTTTATAAGTGAAGTAGCAACCATTGGGAGAATACATCATTTGAATGTGGTGCAATTAATTGGATTTTGCACCGAGGGATCAAAACGTGCTCTTGTTTATGAGTTTATGCCTAATGGATCCCTCGATAAGTTTATTTTCTCTAAAGAAGGAAGTGTAAATATAAGCTATAGCCAAATTTTTGAAATATCGGTTGGAGTAGCTCGTGGGATTGCTTATCTCCATCATGGATGTGAAATGAAGATTTTGCATTTTGATATTAAGCCTCACAACATCCTTCTTGATGAGAACTTTACTCCGAAAGTCTCTGACTTTGGATTGGCTAAGCTATATCCTGTGGAGAATAGCATTGTCACAATGACTGCGGCAAGAGGTACCATTGGATATATGGCTCCAGAATTGTTTTACAAAAATATTGGAGGAGTGTCCTATAAGGCCGATGTTTATAGTTTTGGGATGCTTTTGATGGAGATGGCAGGTAAAAGGAAAAACCTAAATGCCCAAGCGGAGCATTCAAGTCAGCTTTATTTTCCTTTATGGATTTATGATCAATTTGGACATGAAGGAGAAATAGAAATAGAAGATGTGACAGAGGAGGAAAAGAAAATAGTAAAGAAGATGATCATAGTGGCACTTTGGTGTATACAATTGAAACCAGATGATCGCCCTTCAATGATCAAGGTAGTGGAGATGCTCGAAGGAGATGTTGAAAGCCTTGAAATGCCTCCAAAGCCAACCCTTTATCCACATGAAACGGTTGTAGACGATCAAAGAACCAACCTTGACCAAACAATGTCGAGTGATGATTACACTAGTTCTTATGATTCTGTTGAAAGAGAAACTAGTTCTCTGATAGAGAATATTGCTTGA 2139 0.3759 MWWWVRVILVLLLPFSLLIQQGSSSTTTSACPPSSCGKISNISYPFRLKDDPIHCGDSRYELSCENNVTTLNLYSGKYYVKSINYNNFIIRLVDIGIQQDNCSSFPLYFLTQSDFCVRYNYVDKYCTDPYQATAGGGGGGGSNAHLFEHIVYLNCTHRVTNNPKYVNISSCLNWSSKSQGYYIYAMAGDLIADDFQVGCHVMLVTPTSWLRNLQGNEVVSYDVIRKALEYGFEISWLRHIFQDRCKGSTQCSLNTSTETLQCVCFCRSFWGTWSETCGIRSQLSFYTKDTIITIWIGLIEVIKGPNLKYEYDTEYIIGLRTGHYVLPSFFAARFLFGMTLFIALLIYKWKKRHLSMFDYIEIYLQQENNLLPIGYSYKEIKKMARGFKDKLGEGGFGTVFKGKLRSGPCVAIKMLGKSKGNGRDFISEVATIGRIHHLNVVQLIGFCTEGSKRALVYEFMPNGSLDKFIFSKEGSVNISYSQIFEISVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFTPKVSDFGLAKLYPVENSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNLNAQAEHSSQLYFPLWIYDQFGHEGEIEIEDVTEEEKKIVKKMIIVALWCIQLKPDDRPSMIKVVEMLEGDVESLEMPPKPTLYPHETVVDDQRTNLDQTMSSDDYTSSYDSVERETSSLIENIA* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0794 712 Gene3D Transferase(Phosphotransferase) domain 1 460 664 - -
Mtr1g0794 712 MobiDBLite consensus disorder prediction 684 712 - -
Mtr1g0794 712 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 9 685 - -
Mtr1g0794 712 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Mtr1g0794 712 ProSiteProfiles Protein kinase domain profile. 385 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0794 712 ProSitePatterns Protein kinases ATP-binding region signature. 391 413 IPR017441 GO:0005524
Mtr1g0794 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Mtr1g0794 712 Pfam Protein kinase domain 388 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0794 712 SMART serkin_6 385 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0794 712 SUPERFAMILY Protein kinase-like (PK-like) 366 656 IPR011009 -
Mtr1g0794 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Mtr1g0794 712 Gene3D Phosphorylase Kinase; domain 1 364 459 - -
Mtr1g0794 712 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 685 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0794 Mtr-Chr1 8942031 8948837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0794 31 671 Receptor kinase-like Gene Family AT5G38260 35.445 9.35e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0794 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0794 - - gmx:100305367 834.713