Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0793 ATGGCAAGATCACACAGTTTCATCATGCTGCTGTTTCTACTACAGCTTATCAATAACAGCAGCAGTCATGAAGAGTGCAGAGAATTGTCATGTGGACCTTACGAACCGATTATTCGATTCCCCTTCCAACTTGTTAAGGAATCATCACAACATGAATGTGTTTATCCTGAGTTTTGCCTATATTGTACTCAAAACAAGAACACCATGATGGTGTTATCTACCACTTCAGGTCCATTCATATTCTTTGTAGATTACATAGACTACGAATCAAACCAACTTTCAATTTCGGACCCAGACAATTGCATTTCGGAAAAAATTCTGAAACTTAACAAGACCTCATTTCCACCTTACCGATTTTATTCAGAATCAATAACAAAATCATCTTTCTTCAATTGTTCTTCATTTAAGAAACGACACCTGAGAAACGAAGATCAATCATCTCAACGGTCACAAGATATGATCACCTGTCCAATTTACATTTCTGATTCCTACGACAGTGTCATCGCATTGGACCTTGTATCGTGTACGAAAATGTTTGACACGTCAAACATATTTGTGCAGTATCTTTCCGTCAGTTTGAGTTGGCCTGAACAAAATTGTACAAAATGCAAAGCTAAAAGCATGAAATGCAAATGGAAGAACAACAATACCAAAGGCAAAACTGAATGTTTTGATTGTAACAAAAAAAGGAAAACAATTCAAATTCCAAAATCTCTTATATACGCCTCTACAGGTTCAATTCTTTTGGGGCTGGTTCTCATCGCTTTATTTAAGATACATCTCTATTTTAGAAAGAAAGAAGAGGATCAAATTAGAGTTGATAAGTTTTTAGAGGATTATCGAGCTCAAAAACCTACTAGATTTTCTTATGCTGATATAAAAAGAATTACAAACGGGTTTAAGGAAAAACTTGGAGAAGGAGCTCACGGAACTGTGTTTAAAGGAAAGCTCTCGAGTGAGATTCTTGTGGCGGTGAAAATGCTCAATGGTACAGAGGGAGAAGGAAAAGAGTTTATAAATGAAGTGGGAATTATGGGAAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGTTTTTGCGCAGATGGAATTCACCGTGCTCTTGTATACAATTTGTTTCCAAATGGTTCGCTACAAAGCTTCATATTTCCACCGGATAACAAGGACCATTTCATGGGGTGGGAGAAGCTACAACAAATTGGTATTGGTATAGCCAAAGGAATTGAGTATCTTCATCTCGGTTGTAACCATCCAATCATTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGAATCCTTTACTCCAAAAATTTCGGACTTTGGTCTCGCCAAATTATGTTCCAAGAATATTAGTGTTGTGTCCATGACAGCGGCTAAGGGAACCTTGGGATACATGGCGCCTGAAGTTCTATCAAGAAATTTTGGGAATGTGTCTCTTAAGTCAGATATTTACAGTTACGGAATGTTGTTGCTAGAAATGGTTGGAGGGAGAAAGAATGTAGACACGTCTGCAGAAACTTTTCATGTGCTATACCCAGAATGGATCCATAACTTATTGGAAGGAGATATATGTATCCATATTGAGGATGAAGGCGATCTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCGATAAATCGTCCATCAATAAAAAATGTTGTGCAAATGTTGGAAACCGGAGAGGATATCGAGTTAATTGTGCCTCCTAATCCTTTTCACTCGATGACTTCCATAACCACTAATGATCAACGCACTTTGGCAAGAAGAACTTTTCAAATGGAAGTGATTCAGAAATAA 1824 0.3755 MARSHSFIMLLFLLQLINNSSSHEECRELSCGPYEPIIRFPFQLVKESSQHECVYPEFCLYCTQNKNTMMVLSTTSGPFIFFVDYIDYESNQLSISDPDNCISEKILKLNKTSFPPYRFYSESITKSSFFNCSSFKKRHLRNEDQSSQRSQDMITCPIYISDSYDSVIALDLVSCTKMFDTSNIFVQYLSVSLSWPEQNCTKCKAKSMKCKWKNNNTKGKTECFDCNKKRKTIQIPKSLIYASTGSILLGLVLIALFKIHLYFRKKEEDQIRVDKFLEDYRAQKPTRFSYADIKRITNGFKEKLGEGAHGTVFKGKLSSEILVAVKMLNGTEGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNLFPNGSLQSFIFPPDNKDHFMGWEKLQQIGIGIAKGIEYLHLGCNHPIIHFDINPHNVLLDESFTPKISDFGLAKLCSKNISVVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDTSAETFHVLYPEWIHNLLEGDICIHIEDEGDLKIAKKLAIVGLWCIQWQPINRPSIKNVVQMLETGEDIELIVPPNPFHSMTSITTNDQRTLARRTFQMEVIQK* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0793 607 Gene3D Phosphorylase Kinase; domain 1 272 372 - -
Mtr1g0793 607 Pfam Wall-associated receptor kinase galacturonan-binding 26 97 IPR025287 GO:0030247
Mtr1g0793 607 PANTHER RECEPTOR-LIKE KINASE 14 607 - -
Mtr1g0793 607 Gene3D Transferase(Phosphotransferase) domain 1 373 574 - -
Mtr1g0793 607 ProSiteProfiles Protein kinase domain profile. 298 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0793 607 SUPERFAMILY Protein kinase-like (PK-like) 281 567 IPR011009 -
Mtr1g0793 607 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Mtr1g0793 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 607 IPR045874 GO:0004672
Mtr1g0793 607 Pfam Protein tyrosine and serine/threonine kinase 300 566 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0793 Mtr-Chr1 8939025 8941196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0793 263 580 Receptor kinase-like Gene Family AT1G66980 47.866 7.22e-92 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0793 PK_Tyr_Ser-Thr 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0793 - - gmx:100811907 815.453