Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0792 ATGTGGTGGATGAGAGTGATATTGGTACTGTTGCTGCCATTTTCGTTTCTATTCCAGCAAGGTACCTGCAGTGCTAGTACTGAGCAAGAGCATACTTGTCTCCCTTCATCTTGTGGTAAAATTTCAAACATAAGTTATCCATTTCGATTAAAAGATGATCCAATTCATTGCGGGGACAGCAGGTATGAGCTATCTTGTGCAAATAATGTTACAACTTTATATTTGTATTCGGGAAAATATCATGTGCAATCCATCAACTACAACAATTTCACAATCAGACTGGTTGATCCCGGAGTTCAACAATCTAATTGCTCTTCACTTCCTCGCTATTTCTTGTCTCGATCGGATTTTTGTGATACTTACGAATATGAGGACAAACATTGCAAGGATCCATACCAAGCCGTGGTAGAAGAAGATCCAAGTGCCCTTCTTTTTGAGCATATAGTTTACTTGAATTGCAGCCATCAAGTGACTAACAGTCCTAAATATGTGAATACTTCTTCATGTCTGAATTTGAACTCCAAATCCAAAGGGTATTATATATATGCTATGGCTGGTGATTTAATTGCTCAAGATTTTCAAGTTGGTTGTCATGTGAAATTGGTTACTCCAACTTCTTGGTCAGGTTTGCAAAGAAATCAAGTACTTTCCTATGATGTCATGCACAAAGCATTGGTATATGGATTTGATATTTCATGGTTCAATCTTCCTTGTAAGAATCTTTGTGGGGATTCAGACTACTGTTCCTTCAACTATACCACCGAGAAACTTCATTGCTATCGTTTCTGCCATAATTTCTGGGGAGGAGATAGGGACGATCGTTTTTGCGGTGTTCGAGGGATATGGTATCAGCTTCGTGTATACGCTAAAGATATTACAATCGCTATTTGGATAGGATTAATTGAAGTAATAAAAGGGCCAAACCTAAAATATGAAGGTGATACAGAATATAAATTAGGATTACGCACAGGACGCTATGTTCTACCATCATTGGTTGCAGCTAGATTTCTGTTTGGGATGACATTATTTATTGCCTTGTTGATATACAAATGGAAGAAAAGACATTTATCAATGTTTGATTATATTGAAATATATCTACAACAAGAAAACAATCTCATGCCCATTGGATATTCATACAAAGAAATTAAGAAAATGGCTAGAGGTTTCAAAGACAAATTAGGTGAAGGAGGCTTTGGCACTGTGTTTAAGGGAAAACTACGTAGCGGTCCTTGTGTGGCAATCAAGATGTTGGGTAAATCAAAAGGTAACGGGCGAGACTTTATAAGTGAAGTAGCAACCATTGGGAGAATACATCATTTGAATGTGGTGCAATTAATTGGATTTTGCACCGAGGGATCAAAACGTGCTCTTGTTTATGAGTTTATGCCTAATGGATCCCTCGATAAGTTTATTTTCTCTAAAGAAGGAAGTGTAAATATAAGCTATAGCCAAATTTTTGAAATATCGGTTGGAGTAGCTCGTGGGATTGCTTATCTCCATCATGGATGCGAAATGAAGATTTTGCATTTTGATATTAAGCCTCACAACATCCTTCTTGATGAGAACTTTACTCCGAAAGTCTCTGACTTTGGATTGGCTAAGCTATATCCTGTGGAGAATAGCATTGTCACAATGACTGCGGCAAGAGGTACCATTGGATATATGGCTCCAGAATTGTTTTACAAAAATATTGGAGGAGTGTCCTATAAGGCCGATGTTTATAGTTTTGGGATGCTTTTGATGGTGATGGCAGGTAAAAGGAAAAACCTAAATGCCCAAGCAGAGCATTCAAGTCAGCTTTATTTTCCTTTATGGATTTATGATCAATTTGGACATGAAGGAGAAATAGAAATAGAAGATGTGACAGAGGAGGAAAAGAAAATAGTAAAGAAGATGATCATAGTGGCACTTTGGTGTATACAATTGAAACCAGATGATCGCCCTTCAATGATCAAGGTAGTGGAGATGCTCGAAGGAGATGTTGAAAGCCTTGAAATGCCTCCAAAGCCAACCCTTTATCCACATGAAACGGTTGTAGACGATCAAAGAACCAACCTTGACCAAACAATGTCGAGTGATGATTACACTAGTTCTTATGATTCTGTTGAAAGAGAAACTAGTTCTCTGATAGAGAATATTGCTTGA 2145 0.3767 MWWMRVILVLLLPFSFLFQQGTCSASTEQEHTCLPSSCGKISNISYPFRLKDDPIHCGDSRYELSCANNVTTLYLYSGKYHVQSINYNNFTIRLVDPGVQQSNCSSLPRYFLSRSDFCDTYEYEDKHCKDPYQAVVEEDPSALLFEHIVYLNCSHQVTNSPKYVNTSSCLNLNSKSKGYYIYAMAGDLIAQDFQVGCHVKLVTPTSWSGLQRNQVLSYDVMHKALVYGFDISWFNLPCKNLCGDSDYCSFNYTTEKLHCYRFCHNFWGGDRDDRFCGVRGIWYQLRVYAKDITIAIWIGLIEVIKGPNLKYEGDTEYKLGLRTGRYVLPSLVAARFLFGMTLFIALLIYKWKKRHLSMFDYIEIYLQQENNLMPIGYSYKEIKKMARGFKDKLGEGGFGTVFKGKLRSGPCVAIKMLGKSKGNGRDFISEVATIGRIHHLNVVQLIGFCTEGSKRALVYEFMPNGSLDKFIFSKEGSVNISYSQIFEISVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFTPKVSDFGLAKLYPVENSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMVMAGKRKNLNAQAEHSSQLYFPLWIYDQFGHEGEIEIEDVTEEEKKIVKKMIIVALWCIQLKPDDRPSMIKVVEMLEGDVESLEMPPKPTLYPHETVVDDQRTNLDQTMSSDDYTSSYDSVERETSSLIENIA* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0792 714 SMART serkin_6 387 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0792 714 Gene3D Transferase(Phosphotransferase) domain 1 462 673 - -
Mtr1g0792 714 Pfam Protein kinase domain 390 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0792 714 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Mtr1g0792 714 Gene3D Phosphorylase Kinase; domain 1 365 461 - -
Mtr1g0792 714 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 687 - -
Mtr1g0792 714 MobiDBLite consensus disorder prediction 688 714 - -
Mtr1g0792 714 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Mtr1g0792 714 ProSiteProfiles Protein kinase domain profile. 387 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0792 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Mtr1g0792 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 687 IPR045874 GO:0004672
Mtr1g0792 714 SUPERFAMILY Protein kinase-like (PK-like) 368 658 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0792 Mtr-Chr1 8933261 8936974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0792 16 673 Receptor kinase-like Gene Family AT5G38260 35.000 5.49e-113 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0792 Pkinase 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0792 - - gmx:100305367 884.404