Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0791 ATGACAGGAGCACATAGCTTGATCATGCTGCTGCTTCTACTACTGCTTATCCATAAAAGCAGCAGTATTGACGAGTGCAGAGAATCATCTTGTGGACCTTACCACAATCTGCAAAATATTCGATTCCCCTTCCAACTAGTTGAGGAATCATCACAAGATCAATGTACTCATCCTGAGTTTTGCCTATATTGTACTGAAAACAAGGAAACCATGATGGTCCTCTCTACCACTTCAGGTCCAATCAAATTCCGTGTATATTACATAGACTACGAATCAAACCGAATTTCAGTGATGGACCCGGACAATTGCATTCCTAAAAAGTTTCTGAAACTTAACAACTCATCATTTCTACCTTACCGATTTTTTCCACAACCAGGAACGACAAAATTGTCTTTCTTCAATTGCTCTTCAGTTAGGAAACAACACTTGAGAAACCATGATCAAACATCCCAAGAGTCGCAAGATATGATCACCTGTCCAGTTTACGTTTCAAATTCTCACAAAAGTGTCCTCTCGTTGGACCTTGTATCATGTGTCAAGATGTTCGATATGGCAACCATGGTACCAGACCTAACGCATAATTTTCTCTCTTTAAGTTGGCCGAAACATAATTGTACAAGGTGCGAAGCAAATGGCATGAAATGCAAATGGAAGAACAACGGCACCAAAGGCGAAACTGAATGTTTTGATTGTAACAAAAAACGGAAAACAATTCAAATTCCAAAATCTCTTATATACGCCTCTACAGGTTCAATTCTTTTGGGGCTGGTTCTCATCGCTTTATTTAAGATACATCTCTATTTTAGAAAGAAAGAAGAGGATCAAATTAGAGTTGATAAGTTTTTAGAGGATTATCGAGCACAAAAACCTACTAGATTTTCTTATGCCGATATAAAAAGAATTACAAACGGGTTCAAGGAAAAGCTAGGAGAAGGAGCTCACGGAACTGTGTTTAAAGGAAAGCTCTCGAGTGAGATTCATGTGGCGGTGAAAATCCTCAATGGTACAGAGGGAGAAGGGAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGCTTCTGCGCAGATGGAATTCACCGCGCTCTTGTCTACAATTTATTTCCAAATGGTTCGCTACAAAGCTTCATATTTCCACCAGATAACAAGGACCATTTCATGGGGTGGGAGAAGCTACAACAAATTGGTATAGGAATTGCCAAAGGAATTGAGTATCTACATCTCGGTTGTAACCATCCAATAATTCACTTCGACATCAACCCTCACAATGTTTTGCTAGATGAATCCTTTACGCCAAAAATTTCGGATTTTGGTCTCGCCAAATTATGTTCCAAGAATCTTAGCGTTGTGTCCATGACAGCTGCTAAGGGAACCTTGGGATACATGGCGCCTGAAGTTCTATCAAGAAATTTTGGGAATGTGTCTCTTAAGTCAGATATTTACAGTTACGGAATGTTGTTGCTAGAAATGGTTGGAGGGAGAAAGAATGTAGACACGTCTGCAGAAACTTTTCATGTGCTATACCCAGAATGGATCCATAACTTATTGGAAGGAGATATACGTATCCATATTGAGGATGAAGGTGATCTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCGATAAATCGTCCATCAATAAAAAATGTTGTGCAAATGTTGGAAACCGGAGAGGATATCGAGTTAATTGTGCCTCCTAATCCTTTTCACTCGATGACTTCCATAACCACTAATGATCAACGCACTTTGGCAAGAAGAACTTTTCAAATGGAAGTGATTAAGGAATAA 1839 0.3931 MTGAHSLIMLLLLLLLIHKSSSIDECRESSCGPYHNLQNIRFPFQLVEESSQDQCTHPEFCLYCTENKETMMVLSTTSGPIKFRVYYIDYESNRISVMDPDNCIPKKFLKLNNSSFLPYRFFPQPGTTKLSFFNCSSVRKQHLRNHDQTSQESQDMITCPVYVSNSHKSVLSLDLVSCVKMFDMATMVPDLTHNFLSLSWPKHNCTRCEANGMKCKWKNNGTKGETECFDCNKKRKTIQIPKSLIYASTGSILLGLVLIALFKIHLYFRKKEEDQIRVDKFLEDYRAQKPTRFSYADIKRITNGFKEKLGEGAHGTVFKGKLSSEIHVAVKILNGTEGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNLFPNGSLQSFIFPPDNKDHFMGWEKLQQIGIGIAKGIEYLHLGCNHPIIHFDINPHNVLLDESFTPKISDFGLAKLCSKNLSVVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDTSAETFHVLYPEWIHNLLEGDIRIHIEDEGDLKIAKKLAIVGLWCIQWQPINRPSIKNVVQMLETGEDIELIVPPNPFHSMTSITTNDQRTLARRTFQMEVIKE* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0791 612 SUPERFAMILY Protein kinase-like (PK-like) 286 572 IPR011009 -
Mtr1g0791 612 Gene3D Phosphorylase Kinase; domain 1 277 377 - -
Mtr1g0791 612 Pfam Protein tyrosine and serine/threonine kinase 305 571 IPR001245 GO:0004672|GO:0006468
Mtr1g0791 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 612 IPR045874 GO:0004672
Mtr1g0791 612 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Mtr1g0791 612 Pfam Wall-associated receptor kinase galacturonan-binding 26 99 IPR025287 GO:0030247
Mtr1g0791 612 ProSiteProfiles Protein kinase domain profile. 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0791 612 PANTHER RECEPTOR-LIKE KINASE 14 612 - -
Mtr1g0791 612 Gene3D Transferase(Phosphotransferase) domain 1 378 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0791 Mtr-Chr1 8930517 8932647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0791 252 606 Receptor kinase-like Gene Family AT4G18250 42.162 4.68e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0791 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0791 - - gmx:100811907 838.565