Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0787 ATGGACGGTGAACGAAAAATGGCCGTTCCTCAAGGGGATGGGCCCATTGATAGTGTTGAGAAAGTTAGAGCAGCATTACATGGGAGAACTACTGGTCCTACAAGGCGTTCAACAAAAGGGCAATGGACTCCTGAGGAGGATGAGACATTGCGAAAGGCTGTTCAGCGTTTCCAAGGAAAAAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTACATAGGTGGCAGAAAGTGTTGAATCCTGAACTTGTTAAAGGGCCGTGGTCTAAAGAGGAAGATGACGTGATGATTGAATTGGTGAACAAATATGGGCCTAAGAAGTGGTCAACTATCGCACAACATTTACCTGGACGTATTGGAAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTAATACGTGCTCATCAGATTTATGGGAACAAGTGGGCTGAATTAACAAAGTTTTTGCCTGGAAGGACAGACAATGCTATTAAAAACCACTGGAACAGTTCAGTCAAAAAGAAATTGGATTCTTACTTGGCTTCAGGCTTGCTTACTCAATTGCAATCTGCACCTCATGTTGGAAATCCAAGCCAATCAATGGTTGCAACATCTTCAAGGTTGCAATGTAATGAAGATGAGAATGCTCTTCAGCGGATTGAAGGAGATGAAGTTTTAGAGTGTAGTCATGAGTCAGCTAATGCTCTCCACTTTCCATCCACTAGAGAGATAACCAGTGTTGACTTACAACCTGAAGAGGAGAATAGACCAAATGAAGAATGTAGTCTTGGGATGGATCATAGTCCAAGTCAAGCATCCTGTTCAGAGCCATATCTTGTATCAATTGACGACTCAATTGACGATGTTACTATATGCATTCCAGAAATTGCTCATCATGAGGCATGCTCTTCTGAATTCAATGACCAATACTCACATGAACCTGGAAATTCCATTAAAGAGAATCACCACCTTAACTTACATTCCTTACCCAATATTTCATCAATGGACTTAGGGAATGACTCTCCGCAGATGCAAAGAGATTGTACAGATCCTAGTGGAATACGTGACTTGGTGAATGTTCCATATCAGACTTCAGTGGGTTTAGCTGCTTCAATGCACATGGAAGCTACATCTATGGATTCTGCTAAACCAGATCATATGTTGATATCTGATGATGAATGTTGCAGAGTCCTGTTTTCAGAGGCAAATAATGATAGACGTTTTATCCATGGAGATTATAATAATGGTGTTGGTACTGTTGAATTTTCTGGTCACCCTGCATTTGTTTGTCAATCATGTCATATTTCGATTTTCGTAACTGGTGGAACCTCAACTCTGCCATTAACTTGTCCTCAGTGTTCTAATAACTTCAAAGGAATGTCATCCTCCCAATCTAACCATCCAGTTCATTCTGCTGAGCCTGAGAATCAGCAGTTTGGCTCCAGAGCACCTGATAACTTCATTTATGGCAATGACATATCCAGTTCTCATTGTATTGATGCTATAGATAGTGCAGTAATGCAAGATGTTAATCAAAACTGTTGTCCAACAGATGAAATGCCAAAGCCAAACATGCACACAGAAAAGGCGGGCAATGGAGCACTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGATATTCCTTTCCTGAGCTGTGATCTTGTACAATCTGGGGGTGATATGCAGCAAGAATTTAGTCCTCTGGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTATGACTCCGTCAAGGTTGTGGGACTCGCCTTCTCGCGATGATAGTCCTGAAGCATTATTGAAAAGTGCAGCTAAAACTTTTGCGGGTACACCATCAATATTAAAGAAACGATGCCGAGATTTGTTATCGCCACTTTCAGATAAAAGAATAGGTAAGAAACATGAGACTGACATGGCATCCTCTTTGTCGAAAGCTTTTTCTAGTTTGGAACCAGATATACTTTCTCCATCTTCATTGCAAAAGCAAAACTCTGGGGCTTCTGGTTTTGATGACGATAAAGAAAATTGCGGACAAGCTGATAAAGGTAAACAAGTAGAGGAGACAATTAAATCGGCAATTTTGGAAGAAAAGAAGTCTCAAAGAGATGCTCTTGACGGTAATTCTCCTGGTAAGGTTAAGCAGCGACATTTTGACGTTGATTCTAAAATGAAGATTGATGCTGCTGCTACTGAGATTGTGCTACAATCTTCTGGAGTTTTGTCTGAACATGATAGGAACGACCTTTCATTATATTCATCTGATCAAGTTGGTTTTAGAGATAGAATTATAGGTTCTAGTGTTAGAACTCCCAGAAACTTGAACAATAGGAGCTCGGAAACAGCTCCAAACCAGAGCATCCCTTCAAAATTATCTTATGAGAATCCATGCAGGTTTAGCTCTCCTTGTGTTCGTGCAAAGGAGCATGAAAATCTTACAGTTTCTGTTAATCGTGTAAAAGCTCCAGGGGATAGTTCAGGGGATCAAAGTAAAAATGATGGAGGTTTTGAAACCTATAGCATATTTGGTGGAACACCTTTCATGAAAGGTTTTGAATCACCTTCTGCATGGAAATCATCTCCTTGGTTCAGGAATACTTTTCTCTGTAGCCCCAATACTGAAATTAGAATTGAGGATTTTGGATTTTTCAAGAGCCCAGAAGGTGAAAGAAGCTACGACGCTATCGGGTTGTTAAAACAAGTCGGTGAACAAACTGCTGCTACATATGAAAATGCACAGGAGCTTTTGAAAAATGATACTCCTAAAGCAGTACCTAAAGATGCATCCGGAAACGATAATAGTCCTAGCGCGAACAATTCTAAATTGACTTCAAATGCTTTGGTTGAGCGACGCGTGCTTGACTTTAGTGAATGCGGAACACCAGAGAAAGGTGATAGCAGCAAATCCTCAGATAGTCGGCTATGA 2970 0.4074 MDGERKMAVPQGDGPIDSVEKVRAALHGRTTGPTRRSTKGQWTPEEDETLRKAVQRFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDVMIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQSAPHVGNPSQSMVATSSRLQCNEDENALQRIEGDEVLECSHESANALHFPSTREITSVDLQPEEENRPNEECSLGMDHSPSQASCSEPYLVSIDDSIDDVTICIPEIAHHEACSSEFNDQYSHEPGNSIKENHHLNLHSLPNISSMDLGNDSPQMQRDCTDPSGIRDLVNVPYQTSVGLAASMHMEATSMDSAKPDHMLISDDECCRVLFSEANNDRRFIHGDYNNGVGTVEFSGHPAFVCQSCHISIFVTGGTSTLPLTCPQCSNNFKGMSSSQSNHPVHSAEPENQQFGSRAPDNFIYGNDISSSHCIDAIDSAVMQDVNQNCCPTDEMPKPNMHTEKAGNGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCMTPSRLWDSPSRDDSPEALLKSAAKTFAGTPSILKKRCRDLLSPLSDKRIGKKHETDMASSLSKAFSSLEPDILSPSSLQKQNSGASGFDDDKENCGQADKGKQVEETIKSAILEEKKSQRDALDGNSPGKVKQRHFDVDSKMKIDAAATEIVLQSSGVLSEHDRNDLSLYSSDQVGFRDRIIGSSVRTPRNLNNRSSETAPNQSIPSKLSYENPCRFSSPCVRAKEHENLTVSVNRVKAPGDSSGDQSKNDGGFETYSIFGGTPFMKGFESPSAWKSSPWFRNTFLCSPNTEIRIEDFGFFKSPEGERSYDAIGLLKQVGEQTAATYENAQELLKNDTPKAVPKDASGNDNSPSANNSKLTSNALVERRVLDFSECGTPEKGDSSKSSDSRL* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0787 989 ProSiteProfiles Myb-like domain profile. 34 85 IPR001005 -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 942 961 - -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 265 285 - -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 1 46 - -
Mtr1g0787 989 CDD SANT 42 85 IPR001005 -
Mtr1g0787 989 ProSiteProfiles Myb-like domain profile. 86 137 IPR001005 -
Mtr1g0787 989 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 192 IPR017930 -
Mtr1g0787 989 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 477 - -
Mtr1g0787 989 PANTHER TRANSCRIPTION REPRESSOR MYB5 560 981 - -
Mtr1g0787 989 SMART sant 142 190 IPR001005 -
Mtr1g0787 989 SMART sant 90 139 IPR001005 -
Mtr1g0787 989 SMART sant 38 87 IPR001005 -
Mtr1g0787 989 PANTHER MYB PROTEIN-RELATED 6 477 - -
Mtr1g0787 989 PANTHER MYB PROTEIN-RELATED 560 981 - -
Mtr1g0787 989 CDD SANT 145 185 IPR001005 -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 689 731 - -
Mtr1g0787 989 Pfam Myb-like DNA-binding domain 39 85 IPR001005 -
Mtr1g0787 989 Pfam Myb-like DNA-binding domain 143 185 IPR001005 -
Mtr1g0787 989 Pfam Myb-like DNA-binding domain 91 137 IPR001005 -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 784 808 - -
Mtr1g0787 989 CDD SANT 93 137 IPR001005 -
Mtr1g0787 989 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 141 IPR017930 -
Mtr1g0787 989 SUPERFAMILY Homeodomain-like 88 184 IPR009057 -
Mtr1g0787 989 Gene3D - 91 142 - -
Mtr1g0787 989 SUPERFAMILY Homeodomain-like 37 99 IPR009057 -
Mtr1g0787 989 ProSiteProfiles Myb-like domain profile. 138 188 IPR001005 -
Mtr1g0787 989 Gene3D - 144 207 - -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 669 731 - -
Mtr1g0787 989 Gene3D - 38 90 - -
Mtr1g0787 989 MobiDBLite consensus disorder prediction 930 989 - -
Mtr1g0787 989 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 85 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0787 Mtr-Chr1 8890241 8897317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0787 4 979 MYB Transcription Factor Family AT4G32730 40.637 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr1g0787 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0787 - K09420 aprc:113848458 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0787 1 8890241 8897317 Mtr1g0787 1 8890241 8897317 ECH