Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0766 ATGGAGGTAAACGGTGAGAATAGGGATAGCAGAAGAGTGATCGATCCAAGAAGTGGGTTTTGCAGCAGCAATTCAATCTTCTACAGCAAGAGAAAGCCCCTTCCACTTCCACCTAACCACTCTTTAGATGCCACCACTTTCATCTCCTCCCGCGCTCATCACGGCCATATCGCCTTCATTGACGCCTCCACCGGCCACCAATTCACTTACCAACAACTCTGGCGATCCGTCGACTCCGTCACCTCCTCACTCTCCAACATGGGTATCCGTAAAGGTGACGTCATCCTTCTCCTCTCTCCCAACTCCATCTATTTCCCTGTTGTCTGTCTCTCCGTCATGTCCCTCGGCGCTATCATCACCACCACCAATCCTCTCAATACATCTGGTGAAATTGCTAAACAGATTGCTGATTCCAAACCTGTTCTTGCTTTCACTACTCAACAACTCCTTTCCAAAATCACCCAAGCATCACCTTCACTTCCAATCATTCTCATGGACACCAACAACAACAACAACAACTCATCATCATCTTCAACAACAACAACAACACTGGATGAAATGATGAAGAAAGAACCTGAGTTGAGTAGAGTGACTGAGCGCGTCAACCAGAATGACACAGCCACATTACTCTACTCATCAGGAACAACAGGACCAAGCAAAGGAGTAGTATCTTCCCACAAGAATCTAATAGCGATGGTTCAAGTTGTAATGGCTAGGTTCGGTAAAGAACAAGAGACAAGAGAAACTTTCATATGTACTGTTCCGATGTTTCATATATACGGTCTTGCGGTGTTTGCTATGGGGCTTCTTGCTATGGGTTCAACCATAGTTGTTCTCTCTAAATTCGAGATGCACGACATGCTTTCATCGATTGAAAAATTCAGAGCAACCTTCTTACCTCTTGTGCCCCCGATATTGGTTGCTATGCTGAACAACGCAGATGCTATTAAGAGAAAGTATGATTTGAGTTCGCTTCATACGGTGGTTTCTGGTGGTGCTCCTTTGAGTAAAGAAGTAACGGAAGGGTTTATTGAAAAGTACCCTAATGTAAGTATCTTTCAAGGTTATGGTTTAACTGAATCCTCTGGAATTGGAGCTTCTACCGAGTCTTTGGAAGAGAGTCGTAAGTATGGTACGGCGGGGCTTGTGTCTGCTTCCACGGAGGCTATGATTGTTGACACTGAGACTGCTCAGCCGTTGCCCGTTAATCGGACGGGTGAGCTTTGGCTTCGTGGTCCCACCACTATGAAAGGTTATTTCAGTAACGAGGAGGCAACCAGATCGACCATTACTCCAGAGGGTTGGTTAAAAACAGGGGATGTTTGCTATATTGATAGCGATGGATTCTTATTTGTCGTCGATCGTTTGAAAGAGCTCATTAAGTACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCTTTGTTGCTTACTCATCCTGCTATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGCTGGGCAGGTTCCAATGGCATATGTGGTAAGGAATGTGGGAAGTAACTTGTCCGGAAGCCAAGTTATGGATTTTGTTGCAGAGCAGGTGGCTCCATACAAAAGAATTCGAAAAGTGGCATTTATATCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTCGGAAGGATCTTATCAAGCTAGCTACGTCTAAACTCTGA 1683 0.4492 MEVNGENRDSRRVIDPRSGFCSSNSIFYSKRKPLPLPPNHSLDATTFISSRAHHGHIAFIDASTGHQFTYQQLWRSVDSVTSSLSNMGIRKGDVILLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTSGEIAKQIADSKPVLAFTTQQLLSKITQASPSLPIILMDTNNNNNNSSSSSTTTTTLDEMMKKEPELSRVTERVNQNDTATLLYSSGTTGPSKGVVSSHKNLIAMVQVVMARFGKEQETRETFICTVPMFHIYGLAVFAMGLLAMGSTIVVLSKFEMHDMLSSIEKFRATFLPLVPPILVAMLNNADAIKRKYDLSSLHTVVSGGAPLSKEVTEGFIEKYPNVSIFQGYGLTESSGIGASTESLEESRKYGTAGLVSASTEAMIVDTETAQPLPVNRTGELWLRGPTTMKGYFSNEEATRSTITPEGWLKTGDVCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVRNVGSNLSGSQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0766 560 Pfam AMP-binding enzyme C-terminal domain 471 546 IPR025110 -
Mtr1g0766 560 CDD 4CL 36 552 - -
Mtr1g0766 560 Gene3D - 458 559 IPR045851 -
Mtr1g0766 560 Pfam AMP-binding enzyme 51 462 IPR000873 -
Mtr1g0766 560 SUPERFAMILY Acetyl-CoA synthetase-like 49 557 - -
Mtr1g0766 560 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Mtr1g0766 560 Gene3D - 24 457 IPR042099 -
Mtr1g0766 560 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 14 559 - -
Mtr1g0766 560 MobiDBLite consensus disorder prediction 166 185 - -
Mtr1g0766 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0766 Mtr-Chr1 8613765 8616965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0766 13 560 Monolignol Biosynthesis Gene Families AT1G20500 65.642 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0766 K10526 - gmx:100811344 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0766 1 8613765 8616965 Mtr1g0766 1 8613765 8616965 ECH