Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0759 ATGGGTAACTCCACCAGTGTAACTACGACCAAGGGACAAAAACCACCTGAAACTCACACACACAATAACGAGGTCTCAGTCATCAATCTTTCTTCACACCAAGGGCCAGATGCAGTTTTGCGAGATGGAAAGGAAATACTTTTTCAGGCATTTAACTGGGAGTCTCACAAATACGATTGGTGGGCAAATTTAGAAAGCAAAGTTCCGGACATAGCTAAAGCTGGAATCACTTCAGCATGGTTGCCACCGCCAACTCATTCCTTCTCGCCTGAAGGTTACACTCCTCAGAACCTTTACTCTCTTAATAGTAAATATGGTTCTGAGCATCAATTAAAAGCTTTACTTCAAAAGTTGAAGCAACAGAAAGTCAGAGCAATGGCTGATATAGTTATCAATCATCGTGTTGGTACCACCCAAGGACATGGAGGGATGTATAATCGTTTTGATGGAATTCCATTACCGTGGGATGAACGTGCTGTAACATCATCTACTGGTGGACTGGGTAATCGAAACACTGGGGCCATTTTCCACGGGTTTCCCAATATCGACCATACTCAAGATTTTGTGAGAAAGGATATCATAGGATGGCTTCAGTGGCTTCGCCATAATGTAGGCTTTCAGGATTTTCGTTTTGATTATGCAAAAGGATATTCACCAAAATATGTGAAAGAATATATTGAAGGACCAAAGCCAATGTTATCTGTTGGGGAGTATTGGGATACATGCAACTACAACGGTTCTACTTTGGACTATAACCAAGATAACCATAGACAACGAATAATCAATTGGATTGATGGCACTGGACAGCTTTCAACTGCATTTGACTTCACAACGAAGGGAATTCTCCAGGAAGCTGTCAAGAGAGAATTTTGGCGTCTGCGTGATGCTCAAGGGAAGCCACCTGGTGTGATTGGATGGTGGCCTTCAAGATCAGTCACATTTGTAGATAATCATGATACTGGCTCAACTCAGGCTCACTGGCCCTTCCCCTCTGATCATGTTATGGAGGGGTATGCATACATATTGACTCATCCTGGGACACCAACAATTTTCTATGACCACTTTTATGATTGGAATAACTCATTTCATGAGCAGATTGTGAAGTTGATTGACACTCGCAAGCGTCAAGATATTCATAGCAGATCACCTATTAGGATTCTGGAGGCCAAGCACAACGTTTACTCTGCAATCATTGGGGAGAAAGTGTGCATGAAGATTGGAGATGGTTCATGGAGCCCATCTGGGAGGGAATGGACACTCTCAACATGTGGCTATAACTATGCTGTATGGCACAAGTAG 1299 0.428 MGNSTSVTTTKGQKPPETHTHNNEVSVINLSSHQGPDAVLRDGKEILFQAFNWESHKYDWWANLESKVPDIAKAGITSAWLPPPTHSFSPEGYTPQNLYSLNSKYGSEHQLKALLQKLKQQKVRAMADIVINHRVGTTQGHGGMYNRFDGIPLPWDERAVTSSTGGLGNRNTGAIFHGFPNIDHTQDFVRKDIIGWLQWLRHNVGFQDFRFDYAKGYSPKYVKEYIEGPKPMLSVGEYWDTCNYNGSTLDYNQDNHRQRIINWIDGTGQLSTAFDFTTKGILQEAVKREFWRLRDAQGKPPGVIGWWPSRSVTFVDNHDTGSTQAHWPFPSDHVMEGYAYILTHPGTPTIFYDHFYDWNNSFHEQIVKLIDTRKRQDIHSRSPIRILEAKHNVYSAIIGEKVCMKIGDGSWSPSGREWTLSTCGYNYAVWHK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0759 432 SMART alpha-amyl_c2 374 432 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mtr1g0759 432 Gene3D - 378 432 IPR013780 -
Mtr1g0759 432 SUPERFAMILY (Trans)glycosidases 53 363 IPR017853 -
Mtr1g0759 432 PIRSF Alpha-amylase_plant 20 432 IPR013775 GO:0004556|GO:0005509|GO:0005975
Mtr1g0759 432 PANTHER ALPHA-AMYLASE 2-RELATED 40 432 - -
Mtr1g0759 432 Pfam Alpha amylase, catalytic domain 66 134 IPR006047 GO:0005975
Mtr1g0759 432 SUPERFAMILY Glycosyl hydrolase domain 378 432 - -
Mtr1g0759 432 Coils Coil 108 128 - -
Mtr1g0759 432 MobiDBLite consensus disorder prediction 1 21 - -
Mtr1g0759 432 CDD AmyAc_arch_bac_plant_AmyA 46 384 - -
Mtr1g0759 432 Gene3D Glycosidases 45 377 - -
Mtr1g0759 432 SMART aamy 45 385 IPR006047 GO:0005975
Mtr1g0759 432 Pfam Alpha-amylase C-terminal beta-sheet domain 375 431 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mtr1g0759 432 PRINTS Alpha-amylase signature 122 133 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mtr1g0759 432 PRINTS Alpha-amylase signature 206 217 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mtr1g0759 432 PRINTS Alpha-amylase signature 309 321 IPR006046 GO:0004556|GO:0005975|GO:0043169
Mtr1g0759 432 PANTHER ALPHA-AMYLASE 40 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0759 Mtr-Chr1 8522749 8528073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0759 39 432 Glycoside Hydrolase AT1G76130 77.157 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0759 K01176 - gmx:100813490 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0759 1 8522749 8528073 Mtr1g0759 1 8522749 8528073 ECH