Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0751 ATGGCACTATTCCTGCCTTGCATAGGCATGGGTGTGATCTTATTAGTTTACATGTGTCTTCTTTGGTACGCCACAACCCATCCTTCCACCATCACCATCATTCTCAAACCTGTAATCAACACCGGCCTATCTCCATCCGACCTTCAAAAGCTACCTACCATCACCGGAAAAGACCTTTCAGCCGGCCCCGAATGCGCTGTTTGCCTCGACGACATAACTCAAGAACAATCTGCACGTGTGATTCCAGGTTGCAACCATGCTTTTCATTTGGAATGTGCTGATACATGGCTTTCTAAACAACCTATTTGTCCTGTTTGTAGAGCTAAACTTGATCCTACTCTTTTCATTCCTTCCTCTCATGATCATCAAAATCCATGCTAA 381 0.4462 MALFLPCIGMGVILLVYMCLLWYATTHPSTITIILKPVINTGLSPSDLQKLPTITGKDLSAGPECAVCLDDITQEQSARVIPGCNHAFHLECADTWLSKQPICPVCRAKLDPTLFIPSSHDHQNPC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0751 126 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 126 - -
Mtr1g0751 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 113 IPR013083 -
Mtr1g0751 126 SUPERFAMILY RING/U-box 64 113 - -
Mtr1g0751 126 Pfam Ring finger domain 64 107 IPR001841 -
Mtr1g0751 126 SMART ring_2 65 106 IPR001841 -
Mtr1g0751 126 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 126 - -
Mtr1g0751 126 ProSiteProfiles Zinc finger RING-type profile. 65 107 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0751 Mtr-Chr1 8460318 8460698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0751 1 126 C3H Transcription Factor Family AT5G42200 48.485 5.99e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0751 K19037 - gmx:100817919 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0751 1 8460318 8460698 Mtr1g0751 1 8460318 8460698 ECH
Mtr1g0751 1 8460318 8460698 Mtr3g4297 3 56883170 56884362 PCT