Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0725 ATGGCATCGGCGATCATGAAGAAGGGAATTAACAGTATTGAAAGCATGAATCCGTCGTCTATTTTGGTAGACAATTCTGTTGATAAATTGGTAAACACTATTCTTGAAGAAAATGAGGAACATGGACAAGAAAGTATTGCCGACATCAAACCTCGCTTGGATATGATATTTGAATCCGAGGTAGCTGCTTATGAATTTTATAATGAGTATAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGGGAATAAAAGCAAAAAAGATGGGGTTTTAACTTCAAGAAGATTCACATGCTACAAAGAAGGTACACGAAGTGTTGACAAAAGACGTCAACCGACTGGGGAGTCTACGGCAGAAACTAGAACGGGGTGTAATGCACGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATACAAGGTTGTTGACTTTGTACTAGAACACAACCACCTTCTTCAACCGCAAGAGTATGTTCACATGATTCGCTCTCATCGTCGCATATCTGAGGTACAAGCATCACAAATTATAATGGGAGATGAATCTGGATTAAGACCAAAAGAATTGCATGAATATATGTCCAAGCAGGCTGGTGGGATAGAGATGGTTGGTTTTACAAGAACAGACGCTAAGAATTTGCTTCGAACAAAAAGGATGGACTCACTAAAGTATGGTGAAGTGGGTGCATTGATGACTTATTTCAAACAAGAAAGCAAAAATCCATCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCAGATGCACAAATGATCAATGATTATGGGTACTTTGGTGATGTCGTTACTTTTGACACCACATATAAGACAAATAAGGGTTATCGGCCATTGGGAGTATTTGTTGGACTTAATAATCATCGGCAAACAATCATTTTTGGTGCAACATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTATTTGAAACTTTTCTCAAAGCAATTGGTGGAAAAAAGCCTAAAACCATTCTAACGGATCAAGATGCTGCGATGGCAAAGGGTATTTCTTTAGTTATGCCGGAGACATTTCATGGATTATGTACTTGGCATATAAGACAAAACGCTCTAAGGCATGTGAACCATCTATATCAAAGGAGTAAGCATTTTTGTTCTGATTTTGAAGCTTGCATAGATCTACACGAAGAGGAAGATGAATTTTTGAATGCATGGAACTCTTTACTTGTTGAGCATAATGTTTTGGAAGGTTCGTGGTTGCATATGATTTTTCGATTTAAGGAAAAATGGGCATGGACTTATGTTCGAAAAACGTTCACTGCAGGTATGAGATCTACGCAATTAAGTGAAAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCGGATTTAAATTTAATACAATTTTTTACACACTTTAAAAGGGCTGTCAATGGTAAACGGAACAATGAGTCAGAAGCTGAATATGAGTCAAGACATAAGCTACCTAGATTGAAAATGAAGAAGGCTCGAATGCTCGTCCAAGCCGGAAATGTTTACACCCCAAAAATATTTGAGGAATTCCAAGAGAAATATGAGGAATATCAAGACACTTGCATAAAGGTGTTGAAAGAAGGTTTGTATGCTGTCACAAATTATGATAATGTAAAAGAGAGGACAGTTATGGGAAATCCTATGGAACAAAAAGTTTCTTGCGATTGTCGTAGATTTGAGACACACGGCATCTTATGTAGTCATGCTTTGAAAGTGTTGGATGGCATGAATATTAAGTTAATTCCTGAACACTATATACTAAAGCGATGGACAAGAGAGGCAAGGTTGGGAAGTAATCAAGATTGGAAAGGGATGCATGTTGAACTAGACATGAAAGCCCATTTCATGAAGCGATACAGTGAGTTATGTCCTCCAGCGATTAAATTGGCCAACAGAGCTTCAGAATCTCATGAAACTTACACTTTTTTGTCCAAAGTTTATGAAGAGTCCAGCAAAATAGTTGAAGATATGTTGGCCAAAAAATGTGTGGATGGAGAATCAAGTGGAATGGTTCAGGTAACCATATCACTTGGAAATGATAAAACTCAGAACAGCGTGGAAACTGTTGTCAAGGCAAAAGGCATAAAGAAGCTAGATTGTTCACGTTCCACTAAAAAACGAGCTAAATCTTGGGTTGAGAAAGATTCTAAAAAGAGAAAGAAATACATTCAGTCTCAAAAAAAGAGAAAATCACAGGAAAAACAGTCGTTAGCGCAACCACCTAACCTCAATTCAATTTCTCTCAATGGAACTCATCATCAAGCTTCAATTCAAGGGACACAATCAAGTCAAGCTAACAACGGAATTCTATGTCAAACTGCAATCCAAGGGACACAATCAAGCGAAGTTGATAATGGAGCTCAATGTCAAGCTACAATCCAAGGGGCACAATGA 2427 0.3729 MASAIMKKGINSIESMNPSSILVDNSVDKLVNTILEENEEHGQESIADIKPRLDMIFESEVAAYEFYNEYSKRIGFGIRREYGNKSKKDGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVVDFVLEHNHLLQPQEYVHMIRSHRRISEVQASQIIMGDESGLRPKELHEYMSKQAGGIEMVGFTRTDAKNLLRTKRMDSLKYGEVGALMTYFKQESKNPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTYKTNKGYRPLGVFVGLNNHRQTIIFGATLLYDETIPSFQWLFETFLKAIGGKKPKTILTDQDAAMAKGISLVMPETFHGLCTWHIRQNALRHVNHLYQRSKHFCSDFEACIDLHEEEDEFLNAWNSLLVEHNVLEGSWLHMIFRFKEKWAWTYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLIQFFTHFKRAVNGKRNNESEAEYESRHKLPRLKMKKARMLVQAGNVYTPKIFEEFQEKYEEYQDTCIKVLKEGLYAVTNYDNVKERTVMGNPMEQKVSCDCRRFETHGILCSHALKVLDGMNIKLIPEHYILKRWTREARLGSNQDWKGMHVELDMKAHFMKRYSELCPPAIKLANRASESHETYTFLSKVYEESSKIVEDMLAKKCVDGESSGMVQVTISLGNDKTQNSVETVVKAKGIKKLDCSRSTKKRAKSWVEKDSKKRKKYIQSQKKRKSQEKQSLAQPPNLNSISLNGTHHQASIQGTQSSQANNGILCQTAIQGTQSSEVDNGAQCQATIQGAQ* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0725 808 MobiDBLite consensus disorder prediction 746 772 - -
Mtr1g0725 808 Pfam SWIM zinc finger 564 584 IPR007527 GO:0008270
Mtr1g0725 808 Coils Coil 518 538 - -
Mtr1g0725 808 PANTHER OS03G0181600 PROTEIN 32 670 - -
Mtr1g0725 808 ProSiteProfiles Zinc finger SWIM-type profile. 550 588 IPR007527 GO:0008270
Mtr1g0725 808 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 670 IPR031052 GO:0006355
Mtr1g0725 808 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
Mtr1g0725 808 MobiDBLite consensus disorder prediction 717 731 - -
Mtr1g0725 808 SMART 26again6 563 590 IPR006564 GO:0008270
Mtr1g0725 808 Pfam MULE transposase domain 275 369 IPR018289 -
Mtr1g0725 808 MobiDBLite consensus disorder prediction 717 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0725 Mtr-Chr1 8210998 8215806 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g0725 MULE 1.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0725 - - cam:101500125 1204.12