Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0723 ATGGATCACCTATCAATTTTTTCATTCTTATTAGCACTTCATCTATCAATTTCAGGTGTAATTTCAACAACATTCACATTTGTTAACAAATGTGACTACACAGTGTGGCCAGGGATTCTTTCAAATGCTGGGGTCCCAACACTTCCAACCACCGGCTTCGTTCTCCAAACAGGCGAAACCACCACCGTCGCTGCACCAGCCTCATGGGGTGGCCGTTTCTGGGGCAGAACTCTCTGCTCCCAAGACACTGATGGAAAATTCTCATGTGTCACCGGCGATTGTGGCTCCGGAAAGGTTGAATGCTCCGGTAACGGAGCCACACCACCGGCAACTTTAGCCGAATTCACATTAGACGGCTCTGGTGGTCTTGACTTCTTCGATGTTAGTCTTGTTGACGGTTACAATGTGCCTATGCTAGTCGCCCCTCAGGGAGGCTCTGGCGATAATTGCACCACCACAGGATGCATCAGTGATCTCAACGGCGCGTGTCCTTCGGAGCTTAGAGTGATGAGTGTGGATGGGAAAGACGGTGTCGCGTGTAAAAGCGCGTGCGAAGCTTTTAATTCACCGGAGTATTGCTGCAGCGGCGCGTATGGGACACCAGACACTTGCAAACCTTCTACTTATTCTCAATTGTTTAAGAACGCTTGCCCACGTGCATATAGCTATGCATATGATGATAAGACCAGCACTTTCACTTGTGCAAATGCAGTAGATTATACTATCACATTTTGTTCTTCTCCTACCACAAGTCAGAAGTCAACACAAGGGCAAGACACAAAACAAGAAAGTTCTTCTAACTCTGCCTCACCTCAGCTTAACAATGACAATACAATGGTTTATGAAGGTGGTATTGATCAAAGTGAAATCTCAAAGGCCATGTGCACCCATGTGCTCCTGCTCCAATCACAAACTATTGCGTGCATTATTAGCATCACTATGGTCCTTTGGCGGTTGTGCCAACTCTTTTAA 972 0.466 MDHLSIFSFLLALHLSISGVISTTFTFVNKCDYTVWPGILSNAGVPTLPTTGFVLQTGETTTVAAPASWGGRFWGRTLCSQDTDGKFSCVTGDCGSGKVECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVAPQGGSGDNCTTTGCISDLNGACPSELRVMSVDGKDGVACKSACEAFNSPEYCCSGAYGTPDTCKPSTYSQLFKNACPRAYSYAYDDKTSTFTCANAVDYTITFCSSPTTSQKSTQGQDTKQESSSNSASPQLNNDNTMVYEGGIDQSEISKAMCTHVLLLQSQTIACIISITMVLWRLCQLF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0723 323 SUPERFAMILY Osmotin, thaumatin-like protein 23 246 IPR037176 -
Mtr1g0723 323 SMART tha2 25 246 IPR001938 -
Mtr1g0723 323 Pfam Thaumatin family 29 245 IPR001938 -
Mtr1g0723 323 ProSiteProfiles Thaumatin family profile. 22 245 IPR001938 -
Mtr1g0723 323 Gene3D Thaumatin 23 246 IPR037176 -
Mtr1g0723 323 MobiDBLite consensus disorder prediction 248 275 - -
Mtr1g0723 323 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Mtr1g0723 323 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Mtr1g0723 323 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Mtr1g0723 323 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Mtr1g0723 323 PIRSF PR5 2 284 IPR001938 -
Mtr1g0723 323 PANTHER OS03G0233200 PROTEIN 9 273 IPR001938 -
Mtr1g0723 323 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Mtr1g0723 323 CDD TLP-PA 24 245 - -
Mtr1g0723 323 PANTHER BNAA02G17480D PROTEIN 9 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0723 Mtr-Chr1 8185282 8187469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0723 9 265 Receptor kinase-like Gene Family AT5G38280 54.373 1.26e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0723 - - gmx:100787631 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0723 1 8185282 8187469 Mtr1g0723 1 8185282 8187469 ECH