Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0711 ATGTCTGATGAACGATTGACGCGTATTGCCATCGTTAACAACGACAAATGCAAACCGAAAAAGTGTCGTCAAGAGTGCAAGAAGAGTTGTCCTGTCGTCGGAACCGGAAAATTATGTGTTGAGGTTACTTCTGCGTCCAAGATTGCTTACATTTCCGAGGAATTGTGCATTGGATGCGGTATTTGTGTTAAGAAATGTCCTTTTGGAGCCATCGAAATTATCAACTTGCCAAAAAATTTGGACAAAGATACCACTCATAGATATGGTCCTAATACCTTTAAGCTTCACAGGTTGCCGGTTCCCAGACCGGGGCAAGTGCTTGGTTTGGTTGGGACAAATGGAATTGGGAAGTCCACTGCACTTAAGGTTTTGGCTGGAAAACTCAAGCCCAACTTGGGTCGTTTCACGGAACCCCCTGATTGGCAGGAAATTTTGACCCACTTTCGAGGATCTGAATTGCAGAATTACTTTACTCGCATTCTAGAGGATGATTTGAAGGCTATCATTAAGCCTCAATATGTTGACCACATTCCAAAAGCTGTGCAAGGGAACGTGGGGCAGACGCTAGACTCAAAAAATGAGAGAGATATGAAGGAAAAACTTTGTGCTGATCTCGAGCTTAATCAAGTTATAGATCGTAATGTTGGTGATCTTTCAGGGGGTGAGCTCCAAAGGTTTGCCATTGCAGTTGTTGCCATCCAAAATGCTGAGATATACATGTTTGATGAACCTTCCAGTTATCTTGATGTGAAACAGAGGCTGAAAGCTGCGCAAGTTGTTCGGTCATTGCTCAGGCCTAATAGCTTTGTAATTGTTGTCGAGCACGATCTTAGTGTTTTGGACTACTTATCAGACTTTATTTGCTGTTTGTATGGCAAACCTGGTGTATACGGTGTTGTGACACTCCCTTTCTCAGTCAGAGAAGGAATTAATATCTTCTTGTCCGGCTTCGTTCCAACAGAAAATCTTAGGTTTCGGGAGGTCTCTCTTACTTTCAAGGTTGCAGAGAATCCACAGGAAACTGCTGAGGAAGCTCAAACTTATGCTCGATTCAAATACCCAACCATGACCAAAACTCAAGGCAATTTCAGGCTTCATGCAGTTGAAGGAGAATTTACAGATTCACAGATTATTGTGATGCTGGGCGAGAATGGGACAGGAAAGACAACATTCATTCGTATGCTGGCTGGTTTGTTGAAACCCGATACTACAGAAGGTGTATCTGACGTGGAGATGCCCGAGTTCAACGTATCATACAAACCTCAGAAAATTAGCCCAAAGTCCCAATTACCTGTTAGATACATGCTACATCAAAAAATCCGTGATGCATATACTCATCCCCAGTTTATATCAGATGTGATGAAACCACTACTTATTGAACAGTTGATGGACCAAGAGGTTCAGAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCCTTATGCCTTTGTCTTGGAAAGCCTGCAGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCAGAACAGCGTATTGTTGCTGCAAAAGTCATTAAGAGGTTTATTCTTCATGCAAAGAAAACAGCCTTTATCGTTGAGCATGATTTCATCATGGCAACTTATCTTGCTGACAAAGTTATCGTTTATGAGGGTCAACCTTCAATTAATTGTACTGCAAACTGTCCACAATCATTGCTTACCGGGATGAACCTTTTCTTATCTCATCTTGATATCACATTTAGAAGAGACCCAACTAATTTTCGCCCAAGGATCAACAAACTTGAATCAACAAAGGACAGAGAACAAAAGAATGCTGGGTCTTATTATTACCTTGATGACTGA 1824 0.4167 MSDERLTRIAIVNNDKCKPKKCRQECKKSCPVVGTGKLCVEVTSASKIAYISEELCIGCGICVKKCPFGAIEIINLPKNLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFTEPPDWQEILTHFRGSELQNYFTRILEDDLKAIIKPQYVDHIPKAVQGNVGQTLDSKNERDMKEKLCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSFVIVVEHDLSVLDYLSDFICCLYGKPGVYGVVTLPFSVREGINIFLSGFVPTENLRFREVSLTFKVAENPQETAEEAQTYARFKYPTMTKTQGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTTEGVSDVEMPEFNVSYKPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDVMKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGQPSINCTANCPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLESTKDREQKNAGSYYYLDD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0711 607 Gene3D - 336 605 IPR027417 -
Mtr1g0711 607 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 47 76 IPR017896 -
Mtr1g0711 607 SUPERFAMILY 4Fe-4S ferredoxins 8 144 - -
Mtr1g0711 607 ProSitePatterns ABC transporters family signature. 218 232 IPR017871 GO:0005524
Mtr1g0711 607 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 4 607 IPR013283 -
Mtr1g0711 607 SMART AAA_5 103 295 IPR003593 -
Mtr1g0711 607 SMART AAA_5 374 548 IPR003593 -
Mtr1g0711 607 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 316 IPR003439 GO:0005524
Mtr1g0711 607 PANTHER - 4 607 - -
Mtr1g0711 607 CDD ABC_RNaseL_inhibitor_domain1 79 333 IPR034348 -
Mtr1g0711 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 544 IPR027417 -
Mtr1g0711 607 Pfam 4Fe-4S binding domain 50 72 IPR017896 -
Mtr1g0711 607 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 IPR017900 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 25 40 IPR013283 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 53 77 IPR013283 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 80 100 IPR013283 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 108 133 IPR013283 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 141 157 IPR013283 -
Mtr1g0711 607 PRINTS ABC transporter family E signature 157 183 IPR013283 -
Mtr1g0711 607 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 349 570 IPR003439 GO:0005524
Mtr1g0711 607 Pfam Possible Fer4-like domain in RNase L inhibitor, RLI 7 37 IPR007209 -
Mtr1g0711 607 Pfam ABC transporter 103 245 IPR003439 GO:0005524
Mtr1g0711 607 Pfam ABC transporter 366 498 IPR003439 GO:0005524
Mtr1g0711 607 ProSitePatterns ABC transporters family signature. 470 484 IPR017871 GO:0005524
Mtr1g0711 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 293 IPR027417 -
Mtr1g0711 607 CDD ABC_RNaseL_inhibitor_domain2 351 600 - -
Mtr1g0711 607 Gene3D - 1 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0711 Mtr-Chr1 8066278 8072028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0711 351 528 Calmodulin-binding Proteins AT2G36910 24.121 1.91e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0711 K06174 - gmx:100797423 1127.08