Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0701 ATGAGTAGGCCAAAGTTTCCGCCCCCGGTTCCTCTTAACTTTCTGTTTATTGGTCATGTTGATTCCGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGAAAAGGATGTCATCGAGAAACTTGAGAAAGAAGCTGCTGAGATAAACAGACGTTTATTCAAGTATGCTTGGGTGCTTGACAAACTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTTTGGAAGTTTCAGACAACCAGCTACTGCTGCACTCTCATTGATGCCCCCGGACACAGGGATTTCATCAAGAACATGATCACCGGGGCGTCTGAAGCTGATTGTGCTGTTCTCATCATTGATTCCACAACTGGTGGTTTTGAAGCCGGTTTTTGTAAGGATGGTCAGACCACTGAACATGTTCAACTTGCCTTCGCTCTCGGTGTTTAA 450 0.4511 MSRPKFPPPVPLNFLFIGHVDSGKSTTAGHLIYKLGGIEKDVIEKLEKEAAEINRRLFKYAWVLDKLKAERERGITIDISLWKFQTTSYCCTLIDAPGHRDFIKNMITGASEADCAVLIIDSTTGGFEAGFCKDGQTTEHVQLAFALGV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0701 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 149 IPR027417 -
Mtr1g0701 149 PANTHER TRANSLATION FACTOR 10 149 - -
Mtr1g0701 149 Pfam Elongation factor Tu GTP binding domain 12 149 IPR000795 GO:0003924|GO:0005525
Mtr1g0701 149 Gene3D - 8 149 IPR027417 -
Mtr1g0701 149 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 10 149 - -
Mtr1g0701 149 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 IPR031157 -
Mtr1g0701 149 PRINTS GTP-binding elongation factor signature 13 26 IPR000795 GO:0003924|GO:0005525
Mtr1g0701 149 PRINTS GTP-binding elongation factor signature 72 80 IPR000795 GO:0003924|GO:0005525
Mtr1g0701 149 PRINTS GTP-binding elongation factor signature 92 102 IPR000795 GO:0003924|GO:0005525
Mtr1g0701 149 PRINTS GTP-binding elongation factor signature 108 119 IPR000795 GO:0003924|GO:0005525
Mtr1g0701 149 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 9 149 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0701 Mtr-Chr1 7961607 7962288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0701 12 149 Eukaryotic Initiation Factors Gene Family AT1G07930 81.884 6.30e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0701 K03231 - mtr:MTR_1g024165 306.99