Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0696 ATGTCACATCCTCAACTGATTGATATGGTCCAACCCGATTCTTCTATTGCAAACAGCATGCTTCCTCAGCTAGACGTCGACGAATGGATGATGTATTCTTCTTGTCAGCCTCAAGTTGTGAATCCCTCTATACCTTCAATGAACCAAGAAATGTGGGATCAATATGTCAAGAATTTTAACCTGAGGGATCTTTCAGCTGAAAGCAATAACCAAAGTGAAATTTGTGTCAATGTTGATGCTACTAATAGTGTGAGTACTACTATGGTTGATCCTTCTACCACAAACACCATTTTCGATGAATTTTGCTCAATGAAGGATAAAGATTTTCAGCACCCTCAAGATTGCGCGGTTGGCAACTTAAGTTCTAGTCAAGATGGCCAGTCTCAGATTACTTCTGCTAGTCTAGCTGAGTCGCACGCCTTTTCTCTGCGAGACAACTCTGGTGGTACTTCTTCAAGCCATGTTGATTTTGATGAAAGTATCTTTCTGCAGAATAATAACTCTTGGAAGCAAGTAGCTGCACCAATCCGAACCTACACAAAGGTAACATTATTTCTCTGGAAAAAGCAGGTTCCGAAATTAGTATATGTAGATAACGAGAGTGATGTTTTGCCTGTTGGAGATGATCCTTGGAAGGAATTTGTGGGGTGTGTCCGCCGCATAAGAATATTATCACCTTCAGAAGTTAAAGAGATGAGTGAGGAAGGGATGAAGCTTCTAAACAGTGGAGCATTGCAAGGAATCAATGTGTGA 753 0.409 MSHPQLIDMVQPDSSIANSMLPQLDVDEWMMYSSCQPQVVNPSIPSMNQEMWDQYVKNFNLRDLSAESNNQSEICVNVDATNSVSTTMVDPSTTNTIFDEFCSMKDKDFQHPQDCAVGNLSSSQDGQSQITSASLAESHAFSLRDNSGGTSSSHVDFDESIFLQNNNSWKQVAAPIRTYTKVTLFLWKKQVPKLVYVDNESDVLPVGDDPWKEFVGCVRRIRILSPSEVKEMSEEGMKLLNSGALQGINV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0696 250 Gene3D - 134 233 - -
Mtr1g0696 250 PANTHER AUXIN RESPONSE FACTOR 5 193 248 - -
Mtr1g0696 250 PANTHER AUXIN RESPONSE FACTOR 5 1 182 - -
Mtr1g0696 250 Pfam AUX/IAA family 193 231 IPR033389 -
Mtr1g0696 250 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 193 248 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mtr1g0696 250 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 182 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0696 Mtr-Chr1 7844267 7845791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0696 49 249 B3 DNA Binding Superfamily AT1G19850 46.122 3.61e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mtr1g0696 AUX_IAA 6.9e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0696 K14486 - gmx:100790289 346.28