Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0693 ATGGATGAGAAGATTGACACCGCGGAAAAGAAGGTGTTGGTTGATATTGTAAAATTGGTACAAAAGAAAGGCATGAAGGGTAAAATGGGAGACTGGAAGGAATTCCTGAACAGCAATGATAAAAAATTTGGGGCAGGTATGAGTGATCCATCAAAGAGGTCCCATGAGGTTTTGGCTGCATTTCTAAAGACATTCTCAAAGGATGAGGATTTGAAGTTTTTTGGTAACATCATGCGGCATCATTCAAATCAATACACATTAGAGCGACTGAAAGATAGATCTCAGGATTCCCCTGAGCAGAGGCTAGTCCAAGTAACTCTCCAGCACCCTATGTATCCAATGGATTATTCGCTGCCATCTATTGATGAGGGATGGTTAGTGATAAACCTTAAGAAAAAGGCCAAGGGGATAAAATCTACCACAATGGTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCTTTGGTCAAAGTCTGTGTTGTAGATCACAATTTAGAGGTCAAATTACACAAACTTGTTAAACCGGAGAAAGCAATCAAAGACTACAAAACAGAGATTACCGGTGTCTCTGCTCAAGATCTAGAGACAGTGACTTGCTCCTTAGCTGATATACAGAAATCGATGAAGAAGTTGTTATACAATGGAACCATATTAGTTGGACACAGTTTATATAATGATCTACGTGTGCTGAAGCTTGATTATGTTAGAGTGGTCGACACTGCATACATCTTCCAACCCTTGGATGGCTCTATTCACAGGAGACCTTCGTTGAATAGTTTGTGTCAGTCTGTTTTGGGCTATGAAGTTCGGAAAAAGGGTGCTTCGCATGATTGTCTAGATGATGCATGTGCAACAATGAAACTTGTTCTTGCAAAGATCAAACATGGTGTTGATAAGCCATTTCCATTAACATTGGTTCAAGAGCCTGTTTCAGAAAGTGAGATGTCGAAGCTGCTTATTCACAGAATACCAACCACTGTGAACACTGAAGCACTACACGAAATTGTTCCTGGAGACTTCACAATAGAACGGAAGCCTTCCAGAAACGGTCAAGGAGATAAGTATTCTGCCTTAGCTATTTTTAAGAACCAACGAGAGGCACATGATGCATATGAAAATGTCCAAGGCAGCCAAACAAAGGACTCAAATGGGCGTCTACAGAAACTTGTCACATGTCGGCTGAGTACGGGCATGAGTGTCAGTTTATTTGTTCGGAAAATGGGAATTGATGATCACCACAAAAAAATGCCATCTAAGAGAGATTTACCAGAGGGCGAGATGGTTGATGTTCCCGAGAACAAGAAAGTAAAAATGGATCCTGAAGTTGAAAAGGATGCCTACTTGAAACAGATTGAAGCACTGAATCAACGATTGAAAGAGAGTGAGTTGGAGATTGAATCATTGAGAGAACAGTTGAGGAAAAAGGACTTACAAGTGGATGATTCCAAGGAAGTAAAAGTGGATCATGAAATTGAAAAGGATGCCCACTTGAAAGAGATTGAAGCACTGAATCAACGATTGAAAGAAAGTGAAGCGGAGATTGAATCATCGAGGGAACAGTTGAGAAAAAAGGACTTTGAAATTACTGCTCTGCATAAAATGGTAGCTAACATACAAAAAAGGCAAAAACCTAAAAAGTAG 1653 0.4017 MDEKIDTAEKKVLVDIVKLVQKKGMKGKMGDWKEFLNSNDKKFGAGMSDPSKRSHEVLAAFLKTFSKDEDLKFFGNIMRHHSNQYTLERLKDRSQDSPEQRLVQVTLQHPMYPMDYSLPSIDEGWLVINLKKKAKGIKSTTMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHKLVKPEKAIKDYKTEITGVSAQDLETVTCSLADIQKSMKKLLYNGTILVGHSLYNDLRVLKLDYVRVVDTAYIFQPLDGSIHRRPSLNSLCQSVLGYEVRKKGASHDCLDDACATMKLVLAKIKHGVDKPFPLTLVQEPVSESEMSKLLIHRIPTTVNTEALHEIVPGDFTIERKPSRNGQGDKYSALAIFKNQREAHDAYENVQGSQTKDSNGRLQKLVTCRLSTGMSVSLFVRKMGIDDHHKKMPSKRDLPEGEMVDVPENKKVKMDPEVEKDAYLKQIEALNQRLKESELEIESLREQLRKKDLQVDDSKEVKVDHEIEKDAHLKEIEALNQRLKESEAEIESSREQLRKKDFEITALHKMVANIQKRQKPKK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0693 550 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 426 - -
Mtr1g0693 550 CDD REX1_like 143 294 IPR034922 -
Mtr1g0693 550 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 426 - -
Mtr1g0693 550 Gene3D - 137 305 IPR036397 GO:0003676
Mtr1g0693 550 Coils Coil 448 531 - -
Mtr1g0693 550 Pfam Exonuclease 143 292 IPR013520 -
Mtr1g0693 550 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
Mtr1g0693 550 SMART exoiiiendus 141 302 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0693 Mtr-Chr1 7806325 7812992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0693 138 308 C2H2 Transcription Factor Family AT3G27970 32.105 7.64e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0693 K14570 - gmx:100785565 703.36