Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g0691 | ATGTGCGTGATCCAAACGAGAAAGAGATCGAAGTTGCCGTCGAAAAGAAAAACAGTAAGAGTTGATACTGATGGTGTCATTGAAAGAGTGAAGGAACTTTTTAGAGGTCATAGAGACTTGATCTTGGGATTTAACACCTTTTTGCCAAAGGGCCATGAGATTACCCTTTGTCTGAGGATGAGCAACCTCAACAAGTCTAACACCCTGGTCTACAAAGAGGTTGCTGCACTCTACCAAAACCACCCGGATGCTGCATCTACTCATGCTTTTGCTCGGAATTCCATGTTTCGTGATAGGAGCTCTGCAATGCCAACACTACGGCGAGTGCAGGTTGAAAAGGTTTGTCTTCAGTTCTTATGTCCCTTTCTGTAG | 372 | 0.4435 | MCVIQTRKRSKLPSKRKTVRVDTDGVIERVKELFRGHRDLILGFNTFLPKGHEITLCLRMSNLNKSNTLVYKEVAALYQNHPDAASTHAFARNSMFRDRSSAMPTLRRVQVEKVCLQFLCPFL* | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g0691 | 123 | ProSiteProfiles | PAH domain profile. | 1 | 51 | IPR003822 | GO:0006355 | |
Mtr1g0691 | 123 | Pfam | Paired amphipathic helix repeat | 22 | 48 | IPR003822 | GO:0006355 | |
Mtr1g0691 | 123 | SUPERFAMILY | PAH2 domain | 11 | 50 | IPR036600 | GO:0006355 | |
Mtr1g0691 | 123 | PANTHER | SIN3B-RELATED | 17 | 96 | IPR039774 | GO:0003714 | |
Mtr1g0691 | 123 | Gene3D | Paired amphipathic helix | 2 | 51 | IPR036600 | GO:0006355 | |
Mtr1g0691 | 123 | PANTHER | SIN3A, ISOFORM G | 17 | 96 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g0691 | Mtr-Chr1 | 7744018 | 7747067 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g0691 | 21 | 56 | WRKY Transcription Factor Family | AT4G12020 | 63.889 | 1.87e-10 | 55.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mtr1g0691 | PAH | 1.9e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g0691 | K11644 | - | mtr:MTR_1g023820 | 249.595 |