Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0688 ATGGTGAAATCTAGTTCTTGTTTAAGGTTAATCACATGCGGTGGTGGTAGTGATAAAGAAGATCACCATGTTGTTTCTGAGGCCAAGGATTCAAATGATAAACGCGGTTGGAGTTTTCGGAAGAGATCTGCAAGGCATCGTGTACTTAGCAATACTGTGATAACAGCAGAGACCACATCTTCGGAAAATAAGGAGATTTCAGAATATCCAAGTATTAGTTTTCAATCCTCAGCTGAGCCTAATGTTGTTGAGAAGATTTGTACAACAGATTTCTCTAATGAAAAGCCGCAGTTATCCTCCGATGTCTGCTCGGAGATGCCAGAAACAATTGTCACCGAGACTGAGAATAAGGTGGATGTCAATCCACCGGAATCTGCTGTGATAATCATCCAGGCTTCAATTAGAGGATATTTGGCTCGGAGAGCACTTCTAAAGAGTAAGAATGCAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACTTGGTTAGAAGGCATGCTGTTGGAACATTGCGATGTGTTCAAGCTATTGCTAAAATGCAGCTCCTTGTACGATCACGACATGCTCAGAAGTCACATACCGATGGAAAAAATGATTACTCAAAAACTACGGATAATGAGCATTACACTGCCGAATCAAATGTGAAGCACACTTCTGTGGAAAAGCTTCTCAGCAATAAGTTTGCTTGTCAGCTGTTGGAATCAACACCAAAAAACAAACCTATCCATGTCAAATGTGATCCTTCTAAAGGTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTTTGTTTCGGCAAAAGATTCTGCAGAAGATAAAAAGCCAATTTGTACGACAGAACAGTCGGACGAAACCAAAGATAGCACTCATGCATCTCAATCGGAAACAGATATTCCATCTCAAGTTATTCTTCAGTTGTCCGATTCACCTCTACCATCCGAGGATGAAGAGAAGACTGCCACTTACTATGATACCAACTCACACTTTCAAGCAAGCTTGTCTTCATCTTCTCTTATAAAAGATAACTTGGAAGAGTCTCCTCCCGAAAAGACGGTTACATATGATTCTAAAGTAACCTCCACTGAAATTGATTCTTTCCAAAATGAAATAATGGAATCAAATGCAAGTGTCGGACATGAGCCTAATTCTCCTCAGAATCAAGAAATTGGTGAACAGTACAAACTATCAACGAAAGCATTTGCCTCAGACCAACTAGAGACCGAGGGAAAGAAAATTACATTTGGATCAAGGAAGTTAAGCAATCCCTCATTTATTGCTGCTCAATCAAAATTTGAAGAGCTGAGTTCAAATTCAAATTCGGGTAGGCCGAGTGGTTTGCTTGACCAGGATGTATCGGTTGAGTCACAAGCAGATAGTGCATATATATCAAAAGAGTTCATTTCATCTGAGAATTCTACACCCTATCCTTCCAGAAATGCTGATCCTGAAAGTGGTACCGTACTATCTATTTCTTCAACTCTTGATTCACCTGACAGATCAGAGACTTTGGAAATCGAGCACGATGCCAAAGATTTAGTAGAAGGGATAGTTAATCCTGAAAACAAGACTGATCATGGTGTTGAAGCCAATACTCCGACTTCTAACTTACCTATCTCTGATTCGGATCAATTAGAAACTGTTAATGGTTCCCGTGGCAATGTTGTTGATTCAGTGATGCCTGAGAACTCCAAAGAGCATGCTGTTGAGCCTGAGAAAATTGCATCTGACTTGTTAAGAGAACAAACCGAGACTGTTCTGCAGGATTTCACGTATTCTCAACAAGCTTCACCGGGAAGCTATATGACAATTCCTGAATCTCAAGGAACACCTTCAAGTCAGGTTTCGGTGAAAACTAAAGAGAATAAAATCAACAAGACTGGATCAAGCAGTAGACGCAGGGTACTGTCTGTTGGTAACAAGTCTCCTGCTAATTCAAATCAAGATTCAGGCTCAAGAGTGTTTGTCGGTACCAAGTCTCCTGCGAATGCAAATCACGATTCAGGCTCAAGAGGTAGTAGAGAACAATTGCCTAAGGATCAGCTGAATGGAAAGAGACGCAATTCATTTGGCTCAATAAAACCTGAACACACTGATCAAGAACCTACCAAAGATAATAGTAGTAGCAATAATACTCTTCCCCGTTTCATGCAAGCTACACAATCTGCCAAGGCCAAGATAAATGCAAATTCCTCTCCAAGATCAAGTCCAGATGTGCATGACACTGACATTAACATCAAGAAGAGACATTCCTTACCTGGTGCAACTGGTAAGCAGGGTTCTCCGCGTGTCGAACAGTCATTATCTCCAGCTCCGCAGGGCACAAAGGGCAATGGTTCAACTGAGAGAAAATGGCAGAGGTGA 2355 0.414 MVKSSSCLRLITCGGGSDKEDHHVVSEAKDSNDKRGWSFRKRSARHRVLSNTVITAETTSSENKEISEYPSISFQSSAEPNVVEKICTTDFSNEKPQLSSDVCSEMPETIVTETENKVDVNPPESAVIIIQASIRGYLARRALLKSKNAVKLQAAVRGHLVRRHAVGTLRCVQAIAKMQLLVRSRHAQKSHTDGKNDYSKTTDNEHYTAESNVKHTSVEKLLSNKFACQLLESTPKNKPIHVKCDPSKGDSAWKWLERWMFVSAKDSAEDKKPICTTEQSDETKDSTHASQSETDIPSQVILQLSDSPLPSEDEEKTATYYDTNSHFQASLSSSSLIKDNLEESPPEKTVTYDSKVTSTEIDSFQNEIMESNASVGHEPNSPQNQEIGEQYKLSTKAFASDQLETEGKKITFGSRKLSNPSFIAAQSKFEELSSNSNSGRPSGLLDQDVSVESQADSAYISKEFISSENSTPYPSRNADPESGTVLSISSTLDSPDRSETLEIEHDAKDLVEGIVNPENKTDHGVEANTPTSNLPISDSDQLETVNGSRGNVVDSVMPENSKEHAVEPEKIASDLLREQTETVLQDFTYSQQASPGSYMTIPESQGTPSSQVSVKTKENKINKTGSSSRRRVLSVGNKSPANSNQDSGSRVFVGTKSPANANHDSGSRGSREQLPKDQLNGKRRNSFGSIKPEHTDQEPTKDNSSSNNTLPRFMQATQSAKAKINANSSPRSSPDVHDTDINIKKRHSLPGATGKQGSPRVEQSLSPAPQGTKGNGSTERKWQR* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0688 784 MobiDBLite consensus disorder prediction 270 299 - -
Mtr1g0688 784 SMART iq_5 145 166 IPR000048 GO:0005515
Mtr1g0688 784 SMART iq_5 122 144 IPR000048 GO:0005515
Mtr1g0688 784 MobiDBLite consensus disorder prediction 466 499 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 518 539 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 270 289 - -
Mtr1g0688 784 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Mtr1g0688 784 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Mtr1g0688 784 PANTHER PROTEIN IQ-DOMAIN 32 1 783 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 757 784 - -
Mtr1g0688 784 Pfam Protein of unknown function (DUF4005) 695 754 IPR025064 -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 590 784 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 522 539 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 590 668 - -
Mtr1g0688 784 PANTHER IQ-DOMAIN 5-RELATED 1 783 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 466 496 - -
Mtr1g0688 784 MobiDBLite consensus disorder prediction 701 736 - -
Mtr1g0688 784 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Mtr1g0688 784 Gene3D - 124 164 - -
Mtr1g0688 784 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0688 113 784 IQD Protein Family AT1G19870 37.857 2.50e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0688 - - cam:101492650 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0688 1 7727252 7732490 Mtr1g0688 1 7727252 7732490 ECH